AbstractMitab26BinaryWriter (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

java.lang.Object
- psidev.psi.mi.jami.tab.io.writer.AbstractMitab25BinaryWriter<T,P>
- - psidev.psi.mi.jami.tab.io.writer.AbstractMitab26BinaryWriter<T,P>

All Implemented Interfaces:

InteractionWriter<T>

Direct Known Subclasses:

AbstractMitab27BinaryWriter, LightMitab26BinaryWriter, Mitab26BinaryEvidenceWriter, Mitab26BinaryEvidenceWriter, Mitab26BinaryWriter, Mitab26ModelledBinaryWriter, Mitab26ModelledBinaryWriter
```
public abstract class AbstractMitab26BinaryWriter<T extends BinaryInteraction,P extends Participant>
extends AbstractMitab25BinaryWriter<T,P>
```
Abstract class for MITAB 2.6 writer of binary interactions
Since:
```
20/06/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors
Constructor	Description
`AbstractMitab26BinaryWriter()`	Constructor for AbstractMitab26BinaryWriter.
`AbstractMitab26BinaryWriter(File file)`	Constructor for AbstractMitab26BinaryWriter.
`AbstractMitab26BinaryWriter(OutputStream output)`	Constructor for AbstractMitab26BinaryWriter.
`AbstractMitab26BinaryWriter(Writer writer)`	Constructor for AbstractMitab26BinaryWriter.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`protected void`	`writeBinary(T interaction, P a, P b)`	Writes the binary interaction and its participants in MITAB 2.5

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.AbstractMitab25BinaryWriter
close, end, flush, getColumnFeeder, getVersion, getWriter, hasStarted, initialiseColumnFeeder, initialiseContext, isWriteHeader, reset, setColumnFeeder, setStarted, setVersion, setWriteHeader, start, write, write, write, writeHeader

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - AbstractMitab26BinaryWriter
```
public AbstractMitab26BinaryWriter()
```
    Constructor for AbstractMitab26BinaryWriter.
  - AbstractMitab26BinaryWriter
```
public AbstractMitab26BinaryWriter(File file)
                            throws IOException
```
    Constructor for AbstractMitab26BinaryWriter.
    
    Parameters:
    
    file - a File object.
    
    Throws:
    
    IOException - if any.
  - AbstractMitab26BinaryWriter
```
public AbstractMitab26BinaryWriter(OutputStream output)
```
    Constructor for AbstractMitab26BinaryWriter.
    
    Parameters:
    
    output - a OutputStream object.
  - AbstractMitab26BinaryWriter
```
public AbstractMitab26BinaryWriter(Writer writer)
```
    Constructor for AbstractMitab26BinaryWriter.
    
    Parameters:
    
    writer - a Writer object.
- Method Detail
  - writeBinary
```
protected void writeBinary(T interaction,
                           P a,
                           P b)
                    throws IOException
```
    Writes the binary interaction and its participants in MITAB 2.5 Writes the binary interaction and its participants in MITAB 2.6
    
    Overrides:
    
    writeBinary in class AbstractMitab25BinaryWriter<T extends BinaryInteraction,P extends Participant>
    
    Parameters:
    
    interaction - a binary interaction
    
    a - participant a
    
    b - participant b
    
    Throws:
    
    IOException - if any.