Package psidev.psi.mi.jami.tab.io.writer

Class LightMitab26Writer

java.lang.Object

psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter<Interaction,BinaryInteraction,Participant>

psidev.psi.mi.jami.tab.io.writer.LightMitab25Writer

psidev.psi.mi.jami.tab.io.writer.LightMitab26Writer

All Implemented Interfaces:

InteractionWriter<Interaction>

Direct Known Subclasses:

LightMitab27Writer

public class LightMitab26Writer
extends LightMitab25Writer

Mitab 2.6 writer for light interaction

Since:

20/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightMitab26Writer()	Constructor for LightMitab26Writer.
LightMitab26Writer(File file)	Constructor for LightMitab26Writer.
LightMitab26Writer(File file, ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)	Constructor for LightMitab26Writer.
LightMitab26Writer(OutputStream output)	Constructor for LightMitab26Writer.
LightMitab26Writer(OutputStream output, ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)	Constructor for LightMitab26Writer.
LightMitab26Writer(Writer writer)	Constructor for LightMitab26Writer.
LightMitab26Writer(Writer writer, ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)	Constructor for LightMitab26Writer.

Method Summary

Modifier and Type	Method	Description
MitabVersion	getVersion()	getVersion.
protected void	initialiseFile(File file)	initialiseFile.
protected void	initialiseOutputStream(OutputStream output)	initialiseOutputStream.
protected void	initialiseWriter(Writer writer)	initialiseWriter.

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.LightMitab25Writer

initialiseExpansionMethod

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter

close, end, flush, getBinaryWriter, getExpansionMethod, hasStarted, initialiseContext, isWriteHeader, reset, setBinaryWriter, setExpansionMethod, setStarted, setWriteHeader, start, write, write, write

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightMitab26Writer

public LightMitab26Writer()

Constructor for LightMitab26Writer.

LightMitab26Writer

public LightMitab26Writer(File file)
                   throws IOException

Constructor for LightMitab26Writer.

Parameters:

file - a File object.

Throws:

IOException - if any.

LightMitab26Writer

public LightMitab26Writer(OutputStream output)

Constructor for LightMitab26Writer.

Parameters:

output - a OutputStream object.

LightMitab26Writer

public LightMitab26Writer(Writer writer)

Constructor for LightMitab26Writer.

Parameters:

writer - a Writer object.

LightMitab26Writer

public LightMitab26Writer(File file,
                          ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)
                   throws IOException

Constructor for LightMitab26Writer.

Parameters:

file - a File object.

expansionMethod - a ComplexExpansionMethod object.

Throws:

IOException - if any.

LightMitab26Writer

public LightMitab26Writer(OutputStream output,
                          ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)

Constructor for LightMitab26Writer.

Parameters:

output - a OutputStream object.

expansionMethod - a ComplexExpansionMethod object.

LightMitab26Writer

public LightMitab26Writer(Writer writer,
                          ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)

Constructor for LightMitab26Writer.

Parameters:

writer - a Writer object.

expansionMethod - a ComplexExpansionMethod object.

Method Detail

getVersion

public MitabVersion getVersion()

getVersion.

Overrides:

getVersion in class LightMitab25Writer

Returns:

a MitabVersion object.

initialiseWriter

protected void initialiseWriter(Writer writer)

initialiseWriter.

Overrides:

initialiseWriter in class LightMitab25Writer

Parameters:

writer - a Writer object.

initialiseOutputStream

protected void initialiseOutputStream(OutputStream output)

initialiseOutputStream.

Overrides:

initialiseOutputStream in class LightMitab25Writer

Parameters:

output - a OutputStream object.

initialiseFile

protected void initialiseFile(File file)
                       throws IOException

initialiseFile.

Overrides:

initialiseFile in class LightMitab25Writer

Parameters:

file - a File object.

Throws:

IOException - if any.