Package psidev.psi.mi.jami.tab.io.writer

Class LightMitab27Writer

java.lang.Object

psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter<Interaction,BinaryInteraction,Participant>

psidev.psi.mi.jami.tab.io.writer.LightMitab25Writer

psidev.psi.mi.jami.tab.io.writer.LightMitab26Writer

psidev.psi.mi.jami.tab.io.writer.LightMitab27Writer

All Implemented Interfaces:

InteractionWriter<Interaction>

Direct Known Subclasses:

LightMitab28Writer

public class LightMitab27Writer
extends LightMitab26Writer

Mitab 2.7 writer for light interaction

Since:

20/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightMitab27Writer()	Constructor for LightMitab27Writer.
LightMitab27Writer(File file)	Constructor for LightMitab27Writer.
LightMitab27Writer(File file, ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)	Constructor for LightMitab27Writer.
LightMitab27Writer(OutputStream output)	Constructor for LightMitab27Writer.
LightMitab27Writer(OutputStream output, ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)	Constructor for LightMitab27Writer.
LightMitab27Writer(Writer writer)	Constructor for LightMitab27Writer.
LightMitab27Writer(Writer writer, ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)	Constructor for LightMitab27Writer.

Method Summary

Modifier and Type	Method	Description
MitabVersion	getVersion()	getVersion.
protected void	initialiseFile(File file)	initialiseFile.
protected void	initialiseOutputStream(OutputStream output)	initialiseOutputStream.
protected void	initialiseWriter(Writer writer)	initialiseWriter.

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.LightMitab25Writer

initialiseExpansionMethod

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter

close, end, flush, getBinaryWriter, getExpansionMethod, hasStarted, initialiseContext, isWriteHeader, reset, setBinaryWriter, setExpansionMethod, setStarted, setWriteHeader, start, write, write, write

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightMitab27Writer

public LightMitab27Writer()

Constructor for LightMitab27Writer.

LightMitab27Writer

public LightMitab27Writer(File file)
                   throws IOException

Constructor for LightMitab27Writer.

Parameters:

file - a File object.

Throws:

IOException - if any.

LightMitab27Writer

public LightMitab27Writer(OutputStream output)

Constructor for LightMitab27Writer.

Parameters:

output - a OutputStream object.

LightMitab27Writer

public LightMitab27Writer(Writer writer)

Constructor for LightMitab27Writer.

Parameters:

writer - a Writer object.

LightMitab27Writer

public LightMitab27Writer(File file,
                          ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)
                   throws IOException

Constructor for LightMitab27Writer.

Parameters:

file - a File object.

expansionMethod - a ComplexExpansionMethod object.

Throws:

IOException - if any.

LightMitab27Writer

public LightMitab27Writer(OutputStream output,
                          ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)

Constructor for LightMitab27Writer.

Parameters:

output - a OutputStream object.

expansionMethod - a ComplexExpansionMethod object.

LightMitab27Writer

public LightMitab27Writer(Writer writer,
                          ComplexExpansionMethod<Interaction,BinaryInteraction> expansionMethod)

Constructor for LightMitab27Writer.

Parameters:

writer - a Writer object.

expansionMethod - a ComplexExpansionMethod object.

Method Detail

getVersion

public MitabVersion getVersion()

getVersion.

Overrides:

getVersion in class LightMitab26Writer

Returns:

a MitabVersion object.

initialiseWriter

protected void initialiseWriter(Writer writer)

initialiseWriter.

Overrides:

initialiseWriter in class LightMitab26Writer

Parameters:

writer - a Writer object.

initialiseOutputStream

protected void initialiseOutputStream(OutputStream output)

initialiseOutputStream.

Overrides:

initialiseOutputStream in class LightMitab26Writer

Parameters:

output - a OutputStream object.

initialiseFile

protected void initialiseFile(File file)
                       throws IOException

initialiseFile.

Overrides:

initialiseFile in class LightMitab26Writer

Parameters:

file - a File object.

Throws:

IOException - if any.