Package psidev.psi.mi.jami.tab.io.writer

Class Mitab27ModelledWriter

java.lang.Object

psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter<ModelledInteraction,ModelledBinaryInteraction,ModelledParticipant>

psidev.psi.mi.jami.tab.io.writer.Mitab25ModelledWriter

psidev.psi.mi.jami.tab.io.writer.Mitab26ModelledWriter

psidev.psi.mi.jami.tab.io.writer.Mitab27ModelledWriter

All Implemented Interfaces:

InteractionWriter<ModelledInteraction>

Direct Known Subclasses:

Mitab28ModelledWriter

public class Mitab27ModelledWriter
extends Mitab26ModelledWriter

Mitab 2.7 writer for Modelled interaction

Since:

20/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
Mitab27ModelledWriter()	Constructor for Mitab27ModelledWriter.
Mitab27ModelledWriter(File file)	Constructor for Mitab27ModelledWriter.
Mitab27ModelledWriter(File file, ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)	Constructor for Mitab27ModelledWriter.
Mitab27ModelledWriter(OutputStream output)	Constructor for Mitab27ModelledWriter.
Mitab27ModelledWriter(OutputStream output, ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)	Constructor for Mitab27ModelledWriter.
Mitab27ModelledWriter(Writer writer)	Constructor for Mitab27ModelledWriter.
Mitab27ModelledWriter(Writer writer, ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)	Constructor for Mitab27ModelledWriter.

Method Summary

Modifier and Type	Method	Description
MitabVersion	getVersion()	getVersion.
protected void	initialiseFile(File file)	initialiseFile.
protected void	initialiseOutputStream(OutputStream output)	initialiseOutputStream.
protected void	initialiseWriter(Writer writer)	initialiseWriter.

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.Mitab25ModelledWriter

initialiseExpansionMethod

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter

close, end, flush, getBinaryWriter, getExpansionMethod, hasStarted, initialiseContext, isWriteHeader, reset, setBinaryWriter, setExpansionMethod, setStarted, setWriteHeader, start, write, write, write

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Mitab27ModelledWriter

public Mitab27ModelledWriter()

Constructor for Mitab27ModelledWriter.

Mitab27ModelledWriter

public Mitab27ModelledWriter(File file)
                      throws IOException

Constructor for Mitab27ModelledWriter.

Parameters:

file - a File object.

Throws:

IOException - if any.

Mitab27ModelledWriter

public Mitab27ModelledWriter(OutputStream output)

Constructor for Mitab27ModelledWriter.

Parameters:

output - a OutputStream object.

Mitab27ModelledWriter

public Mitab27ModelledWriter(Writer writer)

Constructor for Mitab27ModelledWriter.

Parameters:

writer - a Writer object.

Mitab27ModelledWriter

public Mitab27ModelledWriter(File file,
                             ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)
                      throws IOException

Constructor for Mitab27ModelledWriter.

Parameters:

file - a File object.

expansionMethod - a ComplexExpansionMethod object.

Throws:

IOException - if any.

Mitab27ModelledWriter

public Mitab27ModelledWriter(OutputStream output,
                             ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)

Constructor for Mitab27ModelledWriter.

Parameters:

output - a OutputStream object.

expansionMethod - a ComplexExpansionMethod object.

Mitab27ModelledWriter

public Mitab27ModelledWriter(Writer writer,
                             ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)

Constructor for Mitab27ModelledWriter.

Parameters:

writer - a Writer object.

expansionMethod - a ComplexExpansionMethod object.

Method Detail

getVersion

public MitabVersion getVersion()

getVersion.

Overrides:

getVersion in class Mitab26ModelledWriter

Returns:

a MitabVersion object.

initialiseWriter

protected void initialiseWriter(Writer writer)

initialiseWriter.

Overrides:

initialiseWriter in class Mitab26ModelledWriter

Parameters:

writer - a Writer object.

initialiseOutputStream

protected void initialiseOutputStream(OutputStream output)

initialiseOutputStream.

Overrides:

initialiseOutputStream in class Mitab26ModelledWriter

Parameters:

output - a OutputStream object.

initialiseFile

protected void initialiseFile(File file)
                       throws IOException

initialiseFile.

Overrides:

initialiseFile in class Mitab26ModelledWriter

Parameters:

file - a File object.

Throws:

IOException - if any.