Package psidev.psi.mi.jami.tab.io.writer.extended

Class Mitab28ModelledWriter

java.lang.Object

psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter<ModelledInteraction,ModelledBinaryInteraction,ModelledParticipant>

psidev.psi.mi.jami.tab.io.writer.extended.Mitab25ModelledWriter

psidev.psi.mi.jami.tab.io.writer.extended.Mitab26ModelledWriter

psidev.psi.mi.jami.tab.io.writer.extended.Mitab27ModelledWriter

psidev.psi.mi.jami.tab.io.writer.extended.Mitab28ModelledWriter

All Implemented Interfaces:

InteractionWriter<ModelledInteraction>

public class Mitab28ModelledWriter
extends Mitab27ModelledWriter

Mitab 2.8 writer for Modelled interaction

Since:

20/06/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
Mitab28ModelledWriter()	Constructor for Mitab28ModelledWriter.
Mitab28ModelledWriter(File file)	Constructor for Mitab28ModelledWriter.
Mitab28ModelledWriter(File file, ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)	Constructor for Mitab28ModelledWriter.
Mitab28ModelledWriter(OutputStream output)	Constructor for Mitab28ModelledWriter.
Mitab28ModelledWriter(OutputStream output, ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)	Constructor for Mitab28ModelledWriter.
Mitab28ModelledWriter(Writer writer)	Constructor for Mitab28ModelledWriter.
Mitab28ModelledWriter(Writer writer, ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)	Constructor for Mitab28ModelledWriter.

Method Summary

Modifier and Type	Method	Description
MitabVersion	getVersion()	getVersion.
protected void	initialiseFile(File file)	initialiseFile.
protected void	initialiseOutputStream(OutputStream output)	initialiseOutputStream.
protected void	initialiseWriter(Writer writer)	initialiseWriter.

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.extended.Mitab25ModelledWriter

initialiseExpansionMethod

Methods inherited from class psidev.psi.mi.jami.tab.io.writer.AbstractMitabWriter

close, end, flush, getBinaryWriter, getExpansionMethod, hasStarted, initialiseContext, isWriteHeader, reset, setBinaryWriter, setExpansionMethod, setStarted, setWriteHeader, start, write, write, write

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Mitab28ModelledWriter

public Mitab28ModelledWriter()

Constructor for Mitab28ModelledWriter.

Mitab28ModelledWriter

public Mitab28ModelledWriter(File file)
                      throws IOException

Constructor for Mitab28ModelledWriter.

Parameters:

file - a File object.

Throws:

IOException - if any.

Mitab28ModelledWriter

public Mitab28ModelledWriter(OutputStream output)

Constructor for Mitab28ModelledWriter.

Parameters:

output - a OutputStream object.

Mitab28ModelledWriter

public Mitab28ModelledWriter(Writer writer)

Constructor for Mitab28ModelledWriter.

Parameters:

writer - a Writer object.

Mitab28ModelledWriter

public Mitab28ModelledWriter(File file,
                             ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)
                      throws IOException

Constructor for Mitab28ModelledWriter.

Parameters:

file - a File object.

expansionMethod - a ComplexExpansionMethod object.

Throws:

IOException - if any.

Mitab28ModelledWriter

public Mitab28ModelledWriter(OutputStream output,
                             ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)

Constructor for Mitab28ModelledWriter.

Parameters:

output - a OutputStream object.

expansionMethod - a ComplexExpansionMethod object.

Mitab28ModelledWriter

public Mitab28ModelledWriter(Writer writer,
                             ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> expansionMethod)

Constructor for Mitab28ModelledWriter.

Parameters:

writer - a Writer object.

expansionMethod - a ComplexExpansionMethod object.

Method Detail

getVersion

public MitabVersion getVersion()

getVersion.

Overrides:

getVersion in class Mitab27ModelledWriter

Returns:

a MitabVersion object.

initialiseWriter

protected void initialiseWriter(Writer writer)

initialiseWriter.

Overrides:

initialiseWriter in class Mitab27ModelledWriter

Parameters:

writer - a Writer object.

initialiseOutputStream

protected void initialiseOutputStream(OutputStream output)

initialiseOutputStream.

Overrides:

initialiseOutputStream in class Mitab27ModelledWriter

Parameters:

output - a OutputStream object.

initialiseFile

protected void initialiseFile(File file)
                       throws IOException

initialiseFile.

Overrides:

initialiseFile in class Mitab27ModelledWriter

Parameters:

file - a File object.

Throws:

IOException - if any.