Package psidev.psi.mi.jami.utils.comparator.participant

Class UnambiguousModelledEntityComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.participant.ModelledEntityComparator

psidev.psi.mi.jami.utils.comparator.participant.UnambiguousModelledEntityComparator

All Implemented Interfaces:

Comparator<ModelledEntity>, CustomizableModelledParticipantComparator<ModelledEntity>

public class UnambiguousModelledEntityComparator
extends ModelledEntityComparator

unambiguous biological entity comparator. It will compare the basic properties of a biological participant using UnambiguousParticipantBaseComparator. This comparator will ignore all the other properties of a biological participant.

Since:

13/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousModelledEntityComparator()	Creates a new UnambiguousModelledParticipantComparator.
UnambiguousModelledEntityComparator(UnambiguousEntityBaseComparator entityBaseComparator)	Constructor for UnambiguousModelledEntityComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(ModelledEntity component1, ModelledEntity component2)	Use UnambiguousModelledParticipantComparator to know if two biological participant are equals.
int	compare(ModelledEntity component1, ModelledEntity component2)	It will compare the basic properties of a biological participant using ParticipantInteractorComparator.
UnambiguousEntityBaseComparator	getEntityBaseComparator()	getEntityBaseComparator

Methods inherited from class psidev.psi.mi.jami.utils.comparator.participant.ModelledEntityComparator

clearProcessedComplexes, getFeatureCollectionComparator, isCheckComplexesAsInteractors, setCheckComplexesAsInteractors

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousModelledEntityComparator

public UnambiguousModelledEntityComparator()

Creates a new UnambiguousModelledParticipantComparator. It will use a UnambiguousParticipantBaseComparator to compare the basic properties of a participant.

UnambiguousModelledEntityComparator

public UnambiguousModelledEntityComparator(UnambiguousEntityBaseComparator entityBaseComparator)

Constructor for UnambiguousModelledEntityComparator.

Parameters:

entityBaseComparator - a UnambiguousEntityBaseComparator object.

Method Detail

getEntityBaseComparator

public UnambiguousEntityBaseComparator getEntityBaseComparator()

getEntityBaseComparator

Overrides:

getEntityBaseComparator in class ModelledEntityComparator

Returns:

a EntityBaseComparator object.

compare

public int compare(ModelledEntity component1,
                   ModelledEntity component2)

It will compare the basic properties of a biological participant using ParticipantInteractorComparator. This comparator will ignore all the other properties of a biological participant. It will compare the basic properties of a component using UnambiguousParticipantBaseComparator. This comparator will ignore all the other properties of a component.

Specified by:

compare in interface Comparator<ModelledEntity>

Overrides:

compare in class ModelledEntityComparator

Parameters:

component1 - a ModelledEntity object.

component2 - a ModelledEntity object.

Returns:

a int.

areEquals

public static boolean areEquals(ModelledEntity component1,
                                ModelledEntity component2)

Use UnambiguousModelledParticipantComparator to know if two biological participant are equals.

Parameters:

component1 - a ModelledEntity object.

component2 - a ModelledEntity object.

Returns:

true if the two biological participant are equal