Package psidev.psi.mi.jami.xml.io.parser

Class JaxbUnmarshallerFactory

java.lang.Object

psidev.psi.mi.jami.xml.io.parser.JaxbUnmarshallerFactory

public class JaxbUnmarshallerFactory
extends Object

Factory to initialise JAXB context depending on the version and the interaction object category

Since:

23/04/14

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Method Summary

Modifier and Type	Method	Description
javax.xml.bind.Unmarshaller	createFullUnmarshaller(PsiXmlVersion version, InteractionCategory category)	createFullUnmarshaller.
javax.xml.bind.Unmarshaller	createFullXml253JAXBUnmarshaller(InteractionCategory category)	createFullXml253JAXBUnmarshaller.
javax.xml.bind.Unmarshaller	createFullXml254JAXBUnmarshaller(InteractionCategory category)	createFullXml254JAXBUnmarshaller.
javax.xml.bind.Unmarshaller	createFullXml300JAXBUnmarshaller(InteractionCategory category)	createFullXml300JAXBUnmarshaller.
javax.xml.bind.Unmarshaller	createUnmarshaller(PsiXmlVersion version, InteractionCategory category)	createUnmarshaller.
javax.xml.bind.Unmarshaller	createXml253JAXBUnmarshaller(InteractionCategory category)	createXml253JAXBUnmarshaller.
javax.xml.bind.Unmarshaller	createXml254JAXBUnmarshaller(InteractionCategory category)	createXml254JAXBUnmarshaller.
javax.xml.bind.Unmarshaller	createXml300JAXBUnmarshaller(InteractionCategory category)	createXml300JAXBUnmarshaller.
static JaxbUnmarshallerFactory	getInstance()	Getter for the field instance.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

getInstance

public static JaxbUnmarshallerFactory getInstance()

Getter for the field instance.

Returns:

a JaxbUnmarshallerFactory object.

createUnmarshaller

public javax.xml.bind.Unmarshaller createUnmarshaller(PsiXmlVersion version,
                                                      InteractionCategory category)
                                               throws javax.xml.bind.JAXBException

createUnmarshaller.

Parameters:

version - : version of PSI XML format

category - : Interaction object category (modelled, evidence, basic, ...)

Returns:

JAXB unmarshaller initialised to parse interaction objects of a certain category in a specific version of the PSI-MI XML format. The unmarhsaller is initialised so it can be used in a streaming way

Throws:

javax.xml.bind.JAXBException - if any.

createFullUnmarshaller

public javax.xml.bind.Unmarshaller createFullUnmarshaller(PsiXmlVersion version,
                                                          InteractionCategory category)
                                                   throws javax.xml.bind.JAXBException

createFullUnmarshaller.

Parameters:

version - : version of PSI XML format

category - : Interaction object category (modelled, evidence, basic, ...)

Returns:

JAXB unmarshaller initialised to parse interaction objects of a certain category in a specific version of the PSI-MI XML format. The unmarhsaller is initialised so it can only be used to parse the all entrySet (no streaming)

Throws:

javax.xml.bind.JAXBException - if any.

createXml300JAXBUnmarshaller

public javax.xml.bind.Unmarshaller createXml300JAXBUnmarshaller(InteractionCategory category)
                                                         throws javax.xml.bind.JAXBException

createXml300JAXBUnmarshaller.

Parameters:

category - a InteractionCategory object.

Returns:

a Unmarshaller object.

Throws:

javax.xml.bind.JAXBException - if any.

createXml253JAXBUnmarshaller

public javax.xml.bind.Unmarshaller createXml253JAXBUnmarshaller(InteractionCategory category)
                                                         throws javax.xml.bind.JAXBException

createXml253JAXBUnmarshaller.

Parameters:

category - a InteractionCategory object.

Returns:

a Unmarshaller object.

Throws:

javax.xml.bind.JAXBException - if any.

createXml254JAXBUnmarshaller

public javax.xml.bind.Unmarshaller createXml254JAXBUnmarshaller(InteractionCategory category)
                                                         throws javax.xml.bind.JAXBException

createXml254JAXBUnmarshaller.

Parameters:

category - a InteractionCategory object.

Returns:

a Unmarshaller object.

Throws:

javax.xml.bind.JAXBException - if any.

createFullXml300JAXBUnmarshaller

public javax.xml.bind.Unmarshaller createFullXml300JAXBUnmarshaller(InteractionCategory category)
                                                             throws javax.xml.bind.JAXBException

createFullXml300JAXBUnmarshaller.

Parameters:

category - a InteractionCategory object.

Returns:

a Unmarshaller object.

Throws:

javax.xml.bind.JAXBException - if any.

createFullXml253JAXBUnmarshaller

public javax.xml.bind.Unmarshaller createFullXml253JAXBUnmarshaller(InteractionCategory category)
                                                             throws javax.xml.bind.JAXBException

createFullXml253JAXBUnmarshaller.

Parameters:

category - a InteractionCategory object.

Returns:

a Unmarshaller object.

Throws:

javax.xml.bind.JAXBException - if any.

createFullXml254JAXBUnmarshaller

public javax.xml.bind.Unmarshaller createFullXml254JAXBUnmarshaller(InteractionCategory category)
                                                             throws javax.xml.bind.JAXBException

createFullXml254JAXBUnmarshaller.

Parameters:

category - a InteractionCategory object.

Returns:

a Unmarshaller object.

Throws:

javax.xml.bind.JAXBException - if any.