Package psidev.psi.mi.jami.xml.io.parser

Class LightXmlBinaryParser

java.lang.Object

psidev.psi.mi.jami.xml.io.parser.AbstractPsixmlBinaryParser<Interaction,BinaryInteraction>

psidev.psi.mi.jami.xml.io.parser.LightXmlBinaryParser

All Implemented Interfaces:

PsiXmlParser<BinaryInteraction>

public class LightXmlBinaryParser
extends AbstractPsixmlBinaryParser<Interaction,BinaryInteraction>

Xml parser creating light binary interactions and ignoring experimental details

Since:

16/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightXmlBinaryParser(File file)	Constructor for LightXmlBinaryParser.
LightXmlBinaryParser(InputStream inputStream)	Constructor for LightXmlBinaryParser.
LightXmlBinaryParser(Reader reader)	Constructor for LightXmlBinaryParser.
LightXmlBinaryParser(URL url)	Constructor for LightXmlBinaryParser.

Method Summary

Modifier and Type	Method	Description
protected ComplexExpansionMethod<Interaction,BinaryInteraction>	initialiseDefaultExpansionMethod()	initialiseDefaultExpansionMethod.

Methods inherited from class psidev.psi.mi.jami.xml.io.parser.AbstractPsixmlBinaryParser

close, getDelegateParser, getExpansionMethod, getInteractorFactory, getListener, getVersion, hasFinished, instantiateInteractionFactory, parseNextInteraction, reInit, setCacheOfObjects, setExpansionMethod, setInteractorFactory, setListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightXmlBinaryParser

public LightXmlBinaryParser(File file)
                     throws FileNotFoundException,
                            XMLStreamException,
                            javax.xml.bind.JAXBException

Constructor for LightXmlBinaryParser.

Parameters:

file - a File object.

Throws:

FileNotFoundException - if any.

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

LightXmlBinaryParser

public LightXmlBinaryParser(InputStream inputStream)
                     throws XMLStreamException,
                            javax.xml.bind.JAXBException

Constructor for LightXmlBinaryParser.

Parameters:

inputStream - a InputStream object.

Throws:

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

LightXmlBinaryParser

public LightXmlBinaryParser(URL url)
                     throws IOException,
                            XMLStreamException,
                            javax.xml.bind.JAXBException

Constructor for LightXmlBinaryParser.

Parameters:

url - a URL object.

Throws:

IOException - if any.

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

LightXmlBinaryParser

public LightXmlBinaryParser(Reader reader)
                     throws XMLStreamException,
                            javax.xml.bind.JAXBException

Constructor for LightXmlBinaryParser.

Parameters:

reader - a Reader object.

Throws:

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

Method Detail

initialiseDefaultExpansionMethod

protected ComplexExpansionMethod<Interaction,BinaryInteraction> initialiseDefaultExpansionMethod()

initialiseDefaultExpansionMethod.

Specified by:

initialiseDefaultExpansionMethod in class AbstractPsixmlBinaryParser<Interaction,BinaryInteraction>

Returns:

a ComplexExpansionMethod object.