XmlNamedParticipantEvidenceWriter (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

java.lang.Object
- psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter<ParticipantEvidence,FeatureEvidence>
- - psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantEvidenceWriter
  - - psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml30.AbstractXmlParticipantEvidenceWriter
    - - psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml30.XmlNamedParticipantEvidenceWriter

All Implemented Interfaces:

ExpandedPsiXmlElementWriter<ParticipantEvidence>, PsiXmlElementWriter<ParticipantEvidence>, PsiXmlParticipantWriter<ParticipantEvidence>
```
public class XmlNamedParticipantEvidenceWriter
extends AbstractXmlParticipantEvidenceWriter
implements ExpandedPsiXmlElementWriter<ParticipantEvidence>
```
Expanded Xml 3.0 writer for a named participant evidence with a shortname and a fullname. It writes full experimental details
Since:
```
14/11/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors
Constructor	Description
`XmlNamedParticipantEvidenceWriter(XMLStreamWriter writer, PsiXmlObjectCache objectIndex)`	Constructor for XmlNamedParticipantEvidenceWriter.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`protected void`	`initialiseParticipantCandidateWriter()`	initialiseParticipantCandidateWriter.
`protected void`	`writeMolecule(Interactor interactor)`	writeMolecule.
`protected void`	`writeNames(ParticipantEvidence object)`	writeNames.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml30.AbstractXmlParticipantEvidenceWriter
getParticipantCandidateWriter, getStoichiometryWriter, initialiseBiologicalRoleWriter, initialiseConfidenceWriter, initialiseCvWriter, initialiseFeatureWriter, initialiseHostOrganismWriter, initialiseInteractorWriter, initialiseParameterWriter, initialiseXrefWriter, setParticipantCandidateWriter, setStoichiometryWriter, writeOtherAttributes, writeParticipantPool, writeStoichiometry

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantEvidenceWriter
getConfidenceWriter, getExperimentalCvWriter, getHostOrganismWriter, getParameterWriter, setConfidenceWriter, setExperimentalCvWriter, setHostOrganismWriter, setParameterWriter, writeConfidences, writeExperimentalInteractor, writeExperimentalPreparations, writeExperimentalRoles, writeHostOrganisms, writeParameters, writeParticipantIdentificationMethods

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter
getAliasWriter, getAttributeWriter, getBiologicalRoleWriter, getFeatureWriter, getInteractorWriter, getObjectIndex, getStreamWriter, getVersion, getXrefWriter, setAliasWriter, setAttributeWriter, setBiologicalRoleWriter, setComplexAsInteractor, setFeatureWriter, setInteractorWriter, setXrefWriter, write, writeAttributes, writeBiologicalRole, writeComplexAsInteractor, writeFeatures, writeInteractor, writeMoleculeDescription, writeMoleculeRef, writeParticipant, writeXref, writeXrefFromParticipantXrefs

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.xml.io.writer.elements.PsiXmlElementWriter
write

- Constructor Detail
  - XmlNamedParticipantEvidenceWriter
```
public XmlNamedParticipantEvidenceWriter(XMLStreamWriter writer,
                                         PsiXmlObjectCache objectIndex)
```
    Constructor for XmlNamedParticipantEvidenceWriter.
    
    Parameters:
    
    writer - a XMLStreamWriter object.
    
    objectIndex - a PsiXmlObjectCache object.
- Method Detail
  - writeMolecule
```
protected void writeMolecule(Interactor interactor)
                      throws XMLStreamException
```
    writeMolecule.
    
    Specified by:
    
    writeMolecule in class AbstractXmlParticipantWriter<ParticipantEvidence,FeatureEvidence>
    
    Parameters:
    
    interactor - a Interactor object.
    
    Throws:
    
    XMLStreamException - if any.
  - writeNames
```
protected void writeNames(ParticipantEvidence object)
                   throws XMLStreamException
```
    writeNames.
    
    Overrides:
    
    writeNames in class AbstractXmlParticipantWriter<ParticipantEvidence,FeatureEvidence>
    
    Parameters:
    
    object - a P object.
    
    Throws:
    
    XMLStreamException - if any.
  - initialiseParticipantCandidateWriter
```
protected void initialiseParticipantCandidateWriter()
```
    initialiseParticipantCandidateWriter.
    
    Specified by:
    
    initialiseParticipantCandidateWriter in class AbstractXmlParticipantEvidenceWriter