XmlParticipantEvidenceWriter (PSI :: JAMI - Java framework for molecular interactions 3.3.0 API)

java.lang.Object
- psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter<ParticipantEvidence,FeatureEvidence>
- - psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantEvidenceWriter
  - - psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml30.AbstractXmlParticipantEvidenceWriter
    - - psidev.psi.mi.jami.xml.io.writer.elements.impl.expanded.xml30.XmlParticipantEvidenceWriter

All Implemented Interfaces:

ExpandedPsiXmlElementWriter<ParticipantEvidence>, PsiXmlElementWriter<ParticipantEvidence>, PsiXmlParticipantWriter<ParticipantEvidence>
```
public class XmlParticipantEvidenceWriter
extends AbstractXmlParticipantEvidenceWriter
implements ExpandedPsiXmlElementWriter<ParticipantEvidence>
```
Expanded XML 3.0 writer for a participant evidence with full experimental details
Since:
```
14/11/13
```
Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors
Constructor	Description
`XmlParticipantEvidenceWriter(XMLStreamWriter writer, PsiXmlObjectCache objectIndex)`	Constructor for XmlParticipantEvidenceWriter.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`protected void`	`initialiseParticipantCandidateWriter()`	initialiseParticipantCandidateWriter.
`protected void`	`writeMolecule(Interactor interactor)`	writeMolecule.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.xml30.AbstractXmlParticipantEvidenceWriter
getParticipantCandidateWriter, getStoichiometryWriter, initialiseBiologicalRoleWriter, initialiseConfidenceWriter, initialiseCvWriter, initialiseFeatureWriter, initialiseHostOrganismWriter, initialiseInteractorWriter, initialiseParameterWriter, initialiseXrefWriter, setParticipantCandidateWriter, setStoichiometryWriter, writeOtherAttributes, writeParticipantPool, writeStoichiometry

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantEvidenceWriter
getConfidenceWriter, getExperimentalCvWriter, getHostOrganismWriter, getParameterWriter, setConfidenceWriter, setExperimentalCvWriter, setHostOrganismWriter, setParameterWriter, writeConfidences, writeExperimentalInteractor, writeExperimentalPreparations, writeExperimentalRoles, writeHostOrganisms, writeParameters, writeParticipantIdentificationMethods

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.elements.impl.abstracts.AbstractXmlParticipantWriter
getAliasWriter, getAttributeWriter, getBiologicalRoleWriter, getFeatureWriter, getInteractorWriter, getObjectIndex, getStreamWriter, getVersion, getXrefWriter, setAliasWriter, setAttributeWriter, setBiologicalRoleWriter, setComplexAsInteractor, setFeatureWriter, setInteractorWriter, setXrefWriter, write, writeAttributes, writeBiologicalRole, writeComplexAsInteractor, writeFeatures, writeInteractor, writeMoleculeDescription, writeMoleculeRef, writeNames, writeParticipant, writeXref, writeXrefFromParticipantXrefs

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.xml.io.writer.elements.PsiXmlElementWriter
write

- Constructor Detail
  - XmlParticipantEvidenceWriter
```
public XmlParticipantEvidenceWriter(XMLStreamWriter writer,
                                    PsiXmlObjectCache objectIndex)
```
    Constructor for XmlParticipantEvidenceWriter.
    
    Parameters:
    
    writer - a XMLStreamWriter object.
    
    objectIndex - a PsiXmlObjectCache object.
- Method Detail
  - initialiseParticipantCandidateWriter
```
protected void initialiseParticipantCandidateWriter()
```
    initialiseParticipantCandidateWriter.
    
    Specified by:
    
    initialiseParticipantCandidateWriter in class AbstractXmlParticipantEvidenceWriter
  - writeMolecule
```
protected void writeMolecule(Interactor interactor)
                      throws XMLStreamException
```
    writeMolecule.
    
    Specified by:
    
    writeMolecule in class AbstractXmlParticipantWriter<ParticipantEvidence,FeatureEvidence>
    
    Parameters:
    
    interactor - a Interactor object.
    
    Throws:
    
    XMLStreamException - if any.