Package psidev.psi.mi.jami.xml.io.writer.expanded

Class ExpandedXmlNamedWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter<T>

psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter<I>

psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlMixWriter<Interaction,ModelledInteraction,InteractionEvidence>

psidev.psi.mi.jami.xml.io.writer.expanded.ExpandedXmlNamedWriter

All Implemented Interfaces:

InteractionWriter<Interaction>

public class ExpandedXmlNamedWriter
extends AbstractExpandedXmlMixWriter<Interaction,ModelledInteraction,InteractionEvidence>

Expanded PSI-XML writer for a mix of named interactions

Since:

19/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
ExpandedXmlNamedWriter(PsiXmlVersion version)	Constructor for ExpandedXmlNamedWriter.
ExpandedXmlNamedWriter(PsiXmlVersion version, File file)	Constructor for ExpandedXmlNamedWriter.
ExpandedXmlNamedWriter(PsiXmlVersion version, OutputStream output)	Constructor for ExpandedXmlNamedWriter.
ExpandedXmlNamedWriter(PsiXmlVersion version, Writer writer)	Constructor for ExpandedXmlNamedWriter.

Method Summary

Modifier and Type	Method	Description
protected void	initialiseDelegateWriters()	initialiseDelegateWriters.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlMixWriter

close, flush, getEvidenceWriter, getLightWriter, getModelledWriter, initialiseSubWriters, reset, setComplexWriter, setDefaultReleaseDate, setDefaultSource, setElementCache, setEvidenceWriter, setInteractionSet, setLightWriter, setModelledWriter, setSourceWriter, setVersion, setWriteComplexesAsInteractors, write, write, write

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter

getInteractionType, initialiseDefaultElementCache, initialiseOptionalWriters, writeComplex, writeInteraction, writeStartEntryContent

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter

end, extractSourceFromInteraction, getComplexWriter, getCurrentInteraction, getCurrentSource, getElementCache, getInteractionsIterator, getInteractionWriter, getProcessedInteractions, getStreamWriter, getSubWritersFactory, getVersion, initialiseContext, initialiseDefaultInteractionSet, initialiseDefaultSource, initialiseSubWriters, isStarted, newXmlSource, setAnnotationsWriter, setCurrentInteraction, setCurrentSource, setEntryAnnotations, setInteractionsIterator, setInteractionWriter, setStarted, setSubWritersFactory, start, writeComplexesAsInteractors, writeEndEntry, writeEndEntryContent, writeEndInteractionList, writeEntryAttributes, writeEntrySetAttributes, writeInteractionListContent, writeSource, writeStartEntry, writeStartInteractionList, writeSubComplexInEntry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExpandedXmlNamedWriter

public ExpandedXmlNamedWriter(PsiXmlVersion version)

Constructor for ExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

ExpandedXmlNamedWriter

public ExpandedXmlNamedWriter(PsiXmlVersion version,
                              File file)
                       throws IOException,
                              XMLStreamException

Constructor for ExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

file - a File object.

Throws:

IOException - if any.

XMLStreamException - if any.

ExpandedXmlNamedWriter

public ExpandedXmlNamedWriter(PsiXmlVersion version,
                              OutputStream output)
                       throws XMLStreamException

Constructor for ExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

output - a OutputStream object.

Throws:

XMLStreamException - if any.

ExpandedXmlNamedWriter

public ExpandedXmlNamedWriter(PsiXmlVersion version,
                              Writer writer)
                       throws XMLStreamException

Constructor for ExpandedXmlNamedWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a Writer object.

Throws:

XMLStreamException - if any.

Method Detail

initialiseDelegateWriters

protected void initialiseDelegateWriters()

initialiseDelegateWriters.

Specified by:

initialiseDelegateWriters in class AbstractExpandedXmlMixWriter<Interaction,ModelledInteraction,InteractionEvidence>