Package psidev.psi.mi.jami.xml.io.writer.expanded.extended

Class LightExpandedXmlBinaryWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter<T>

psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter<BinaryInteraction>

psidev.psi.mi.jami.xml.io.writer.expanded.extended.LightExpandedXmlBinaryWriter

All Implemented Interfaces:

InteractionWriter<BinaryInteraction>

public class LightExpandedXmlBinaryWriter
extends AbstractExpandedXmlWriter<BinaryInteraction>

Expanded PSI-XML writer for light binary interactions (no experimental evidences)

Since:

19/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightExpandedXmlBinaryWriter(PsiXmlVersion version)	Constructor for LightExpandedXmlBinaryWriter.
LightExpandedXmlBinaryWriter(PsiXmlVersion version, File file)	Constructor for LightExpandedXmlBinaryWriter.
LightExpandedXmlBinaryWriter(PsiXmlVersion version, OutputStream output)	Constructor for LightExpandedXmlBinaryWriter.
LightExpandedXmlBinaryWriter(PsiXmlVersion version, Writer writer)	Constructor for LightExpandedXmlBinaryWriter.
LightExpandedXmlBinaryWriter(PsiXmlVersion version, XMLStreamWriter streamWriter, PsiXmlObjectCache cache)	Constructor for LightExpandedXmlBinaryWriter.

Method Summary

Modifier and Type	Method	Description
protected void	initialiseDefaultSource()	initialiseDefaultSource.
protected void	initialiseSubWriters()	initialiseSubWriters.
protected void	writeComplex(ModelledInteraction modelled)	writeComplex.
protected void	writeInteraction()	writeInteraction.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter

getInteractionType, initialiseDefaultElementCache, initialiseOptionalWriters, writeStartEntryContent

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter

close, end, extractSourceFromInteraction, flush, getComplexWriter, getCurrentInteraction, getCurrentSource, getElementCache, getInteractionsIterator, getInteractionWriter, getProcessedInteractions, getStreamWriter, getSubWritersFactory, getVersion, initialiseContext, initialiseDefaultInteractionSet, initialiseSubWriters, isStarted, newXmlSource, reset, setAnnotationsWriter, setComplexWriter, setCurrentInteraction, setCurrentSource, setDefaultReleaseDate, setDefaultSource, setElementCache, setEntryAnnotations, setInteractionSet, setInteractionsIterator, setInteractionWriter, setSourceWriter, setStarted, setSubWritersFactory, setVersion, setWriteComplexesAsInteractors, start, write, write, write, writeComplexesAsInteractors, writeEndEntry, writeEndEntryContent, writeEndInteractionList, writeEntryAttributes, writeEntrySetAttributes, writeInteractionListContent, writeSource, writeStartEntry, writeStartInteractionList, writeSubComplexInEntry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightExpandedXmlBinaryWriter

public LightExpandedXmlBinaryWriter(PsiXmlVersion version)

Constructor for LightExpandedXmlBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

LightExpandedXmlBinaryWriter

public LightExpandedXmlBinaryWriter(PsiXmlVersion version,
                                    File file)
                             throws IOException,
                                    XMLStreamException

Constructor for LightExpandedXmlBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

file - a File object.

Throws:

IOException - if any.

XMLStreamException - if any.

LightExpandedXmlBinaryWriter

public LightExpandedXmlBinaryWriter(PsiXmlVersion version,
                                    OutputStream output)
                             throws XMLStreamException

Constructor for LightExpandedXmlBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

output - a OutputStream object.

Throws:

XMLStreamException - if any.

LightExpandedXmlBinaryWriter

public LightExpandedXmlBinaryWriter(PsiXmlVersion version,
                                    Writer writer)
                             throws XMLStreamException

Constructor for LightExpandedXmlBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a Writer object.

Throws:

XMLStreamException - if any.

LightExpandedXmlBinaryWriter

public LightExpandedXmlBinaryWriter(PsiXmlVersion version,
                                    XMLStreamWriter streamWriter,
                                    PsiXmlObjectCache cache)

Constructor for LightExpandedXmlBinaryWriter.

Parameters:

version - a PsiXmlVersion object.

streamWriter - a XMLStreamWriter object.

cache - a PsiXmlObjectCache object.

Method Detail

initialiseSubWriters

protected void initialiseSubWriters()

initialiseSubWriters.

Specified by:

initialiseSubWriters in class AbstractXmlWriter<BinaryInteraction>

initialiseDefaultSource

protected void initialiseDefaultSource()

initialiseDefaultSource.

Overrides:

initialiseDefaultSource in class AbstractXmlWriter<BinaryInteraction>

writeInteraction

protected void writeInteraction()
                         throws XMLStreamException

writeInteraction.

Overrides:

writeInteraction in class AbstractExpandedXmlWriter<BinaryInteraction>

Throws:

XMLStreamException - if any.

writeComplex

protected void writeComplex(ModelledInteraction modelled)

writeComplex.

Overrides:

writeComplex in class AbstractExpandedXmlWriter<BinaryInteraction>

Parameters:

modelled - a ModelledInteraction object.