Package psidev.psi.mi.jami.xml.io.writer.expanded.extended

Class LightExpandedXmlWriter

java.lang.Object

psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter<T>

psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter<Interaction>

psidev.psi.mi.jami.xml.io.writer.expanded.extended.LightExpandedXmlWriter

All Implemented Interfaces:

InteractionWriter<Interaction>

public class LightExpandedXmlWriter
extends AbstractExpandedXmlWriter<Interaction>

Expanded PSI-XML writer for light interactions (no experimental evidences)

Since:

19/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
LightExpandedXmlWriter(PsiXmlVersion version)	Constructor for LightExpandedXmlWriter.
LightExpandedXmlWriter(PsiXmlVersion version, File file)	Constructor for LightExpandedXmlWriter.
LightExpandedXmlWriter(PsiXmlVersion version, OutputStream output)	Constructor for LightExpandedXmlWriter.
LightExpandedXmlWriter(PsiXmlVersion version, Writer writer)	Constructor for LightExpandedXmlWriter.
LightExpandedXmlWriter(PsiXmlVersion version, XMLStreamWriter streamWriter, PsiXmlObjectCache cache)	Constructor for LightExpandedXmlWriter.

Method Summary

Modifier and Type	Method	Description
protected void	initialiseDefaultSource()	initialiseDefaultSource.
protected void	initialiseSubWriters()	initialiseSubWriters.
protected void	writeComplex(ModelledInteraction modelled)	writeComplex.
protected void	writeInteraction()	writeInteraction.

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.expanded.AbstractExpandedXmlWriter

getInteractionType, initialiseDefaultElementCache, initialiseOptionalWriters, writeStartEntryContent

Methods inherited from class psidev.psi.mi.jami.xml.io.writer.AbstractXmlWriter

close, end, extractSourceFromInteraction, flush, getComplexWriter, getCurrentInteraction, getCurrentSource, getElementCache, getInteractionsIterator, getInteractionWriter, getProcessedInteractions, getStreamWriter, getSubWritersFactory, getVersion, initialiseContext, initialiseDefaultInteractionSet, initialiseSubWriters, isStarted, newXmlSource, reset, setAnnotationsWriter, setComplexWriter, setCurrentInteraction, setCurrentSource, setDefaultReleaseDate, setDefaultSource, setElementCache, setEntryAnnotations, setInteractionSet, setInteractionsIterator, setInteractionWriter, setSourceWriter, setStarted, setSubWritersFactory, setVersion, setWriteComplexesAsInteractors, start, write, write, write, writeComplexesAsInteractors, writeEndEntry, writeEndEntryContent, writeEndInteractionList, writeEntryAttributes, writeEntrySetAttributes, writeInteractionListContent, writeSource, writeStartEntry, writeStartInteractionList, writeSubComplexInEntry

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LightExpandedXmlWriter

public LightExpandedXmlWriter(PsiXmlVersion version)

Constructor for LightExpandedXmlWriter.

Parameters:

version - a PsiXmlVersion object.

LightExpandedXmlWriter

public LightExpandedXmlWriter(PsiXmlVersion version,
                              File file)
                       throws IOException,
                              XMLStreamException

Constructor for LightExpandedXmlWriter.

Parameters:

version - a PsiXmlVersion object.

file - a File object.

Throws:

IOException - if any.

XMLStreamException - if any.

LightExpandedXmlWriter

public LightExpandedXmlWriter(PsiXmlVersion version,
                              OutputStream output)
                       throws XMLStreamException

Constructor for LightExpandedXmlWriter.

Parameters:

version - a PsiXmlVersion object.

output - a OutputStream object.

Throws:

XMLStreamException - if any.

LightExpandedXmlWriter

public LightExpandedXmlWriter(PsiXmlVersion version,
                              Writer writer)
                       throws XMLStreamException

Constructor for LightExpandedXmlWriter.

Parameters:

version - a PsiXmlVersion object.

writer - a Writer object.

Throws:

XMLStreamException - if any.

LightExpandedXmlWriter

public LightExpandedXmlWriter(PsiXmlVersion version,
                              XMLStreamWriter streamWriter,
                              PsiXmlObjectCache cache)

Constructor for LightExpandedXmlWriter.

Parameters:

version - a PsiXmlVersion object.

streamWriter - a XMLStreamWriter object.

cache - a PsiXmlObjectCache object.

Method Detail

initialiseSubWriters

protected void initialiseSubWriters()

initialiseSubWriters.

Specified by:

initialiseSubWriters in class AbstractXmlWriter<Interaction>

initialiseDefaultSource

protected void initialiseDefaultSource()

initialiseDefaultSource.

Overrides:

initialiseDefaultSource in class AbstractXmlWriter<Interaction>

writeInteraction

protected void writeInteraction()
                         throws XMLStreamException

writeInteraction.

Overrides:

writeInteraction in class AbstractExpandedXmlWriter<Interaction>

Throws:

XMLStreamException - if any.

writeComplex

protected void writeComplex(ModelledInteraction modelled)

writeComplex.

Overrides:

writeComplex in class AbstractExpandedXmlWriter<Interaction>

Parameters:

modelled - a ModelledInteraction object.