Package psidev.psi.mi.jami.xml.model.extension.xml300

Class CvTermXrefContainer

java.lang.Object

psidev.psi.mi.jami.xml.model.extension.xml300.XrefContainer

psidev.psi.mi.jami.xml.model.extension.xml300.CvTermXrefContainer

All Implemented Interfaces:

com.sun.xml.bind.Locatable, FileSourceContext

public class CvTermXrefContainer
extends XrefContainer

Container for both xrefs and identifiers in a CvTerm

Since:

19/07/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
CvTermXrefContainer()

Method Summary

Modifier and Type	Method	Description
protected void	clearPropertiesLinkedToIdentifiers()	clearPropertiesLinkedToIdentifiers.
Collection<Xref>	getIdentifiers()	Getter for the field identifiers.
String	getMIIdentifier()	getMIIdentifier.
String	getMODIdentifier()	getMODIdentifier.
String	getPARIdentifier()	getPARIdentifier.
protected void	initialiseIdentifiers()	initialiseIdentifiers.
protected void	initialiseSecondaryRefs()	initialiseSecondaryRefs.
protected boolean	isAnIdentifier(Xref ref)	isAnIdentifier.
protected void	processAddedIdentifierEvent(Xref added)	processAddedIdentifierEvent.
protected void	processAddedPrimaryRef(Xref added)	processAddedPrimaryRef.
protected void	processRemovedIdentifierEvent(Xref removed)	processRemovedIdentifierEvent.
void	setMIIdentifier(String mi)	setMIIdentifier.
void	setMODIdentifier(String mod)	setMODIdentifier.
void	setPARIdentifier(String par)	setPARIdentifier.

Methods inherited from class psidev.psi.mi.jami.xml.model.extension.xml300.XrefContainer

getJAXBSecondaryRefs, getSourceLocator, getXrefs, initialiseSecondaryResWith, initialiseXrefs, initialiseXrefsWith, isEmpty, setJAXBPrimaryRef, setSourceLocator, sourceLocation, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

CvTermXrefContainer

public CvTermXrefContainer()

Method Detail

isAnIdentifier

protected boolean isAnIdentifier(Xref ref)

isAnIdentifier.

Parameters:

ref - a Xref object.

Returns:

a boolean.

processAddedPrimaryRef

protected void processAddedPrimaryRef(Xref added)

processAddedPrimaryRef.

Overrides:

processAddedPrimaryRef in class XrefContainer

Parameters:

added - a Xref object.

getIdentifiers

public Collection<Xref> getIdentifiers()

Getter for the field identifiers.

Returns:

a Collection object.

getMIIdentifier

public String getMIIdentifier()

getMIIdentifier.

Returns:

a String object.

getMODIdentifier

public String getMODIdentifier()

getMODIdentifier.

Returns:

a String object.

getPARIdentifier

public String getPARIdentifier()

getPARIdentifier.

Returns:

a String object.

setMIIdentifier

public void setMIIdentifier(String mi)

setMIIdentifier.

Parameters:

mi - a String object.

setMODIdentifier

public void setMODIdentifier(String mod)

setMODIdentifier.

Parameters:

mod - a String object.

setPARIdentifier

public void setPARIdentifier(String par)

setPARIdentifier.

Parameters:

par - a String object.

processAddedIdentifierEvent

protected void processAddedIdentifierEvent(Xref added)

processAddedIdentifierEvent.

Parameters:

added - a Xref object.

processRemovedIdentifierEvent

protected void processRemovedIdentifierEvent(Xref removed)

processRemovedIdentifierEvent.

Parameters:

removed - a Xref object.

clearPropertiesLinkedToIdentifiers

protected void clearPropertiesLinkedToIdentifiers()

clearPropertiesLinkedToIdentifiers.

initialiseIdentifiers

protected void initialiseIdentifiers()

initialiseIdentifiers.

initialiseSecondaryRefs

protected void initialiseSecondaryRefs()

initialiseSecondaryRefs.

Overrides:

initialiseSecondaryRefs in class XrefContainer