Package psidev.psi.mi.jami.enricher.impl.full

Class FullPolymerEnricher<T extends Polymer>

java.lang.Object

psidev.psi.mi.jami.enricher.impl.AbstractMIEnricher<T>

psidev.psi.mi.jami.enricher.impl.AbstractInteractorEnricher<T>

psidev.psi.mi.jami.enricher.impl.minimal.MinimalInteractorBaseEnricher<T>

psidev.psi.mi.jami.enricher.impl.full.FullInteractorBaseEnricher<T>

psidev.psi.mi.jami.enricher.impl.full.FullPolymerEnricher<T>

All Implemented Interfaces:

InteractorEnricher<T>, MIEnricher<T>

public class FullPolymerEnricher<T extends Polymer>
extends FullInteractorBaseEnricher<T>

Full polymer enricher. - enrich all properties of interactor as described in FullInteractorBaseEnricher - enrich sequence of polymer. If the sequence of the polymer to enrich is null, it will enrich it with the sequence of the fetched polymer

Since:

30/01/14

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
FullPolymerEnricher()	Constructor for FullPolymerEnricher.
FullPolymerEnricher(InteractorFetcher<T> fetcher)	Constructor for FullPolymerEnricher.

Method Summary

Modifier and Type	Method	Description
protected void	processOtherProperties(T polymerToEnrich, T fetched)	processOtherProperties.

Methods inherited from class psidev.psi.mi.jami.enricher.impl.full.FullInteractorBaseEnricher

isFullEnrichment

Methods inherited from class psidev.psi.mi.jami.enricher.impl.minimal.MinimalInteractorBaseEnricher

find, onCompletedEnrichment, onInteractorCheckFailure

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractInteractorEnricher

canEnrichInteractor, enrich, getCvTermEnricher, getInteractorFetcher, getListener, getOrganismEnricher, getRetryCount, onEnrichedVersionNotFound, processAliases, processAnnotations, processChecksums, processFullName, processIdentifiers, processInteractorType, processInteractorType, processOrganism, processOrganism, processShortLabel, processXrefs, setCvTermEnricher, setListener, setOrganismEnricher, setRetryCount

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractMIEnricher

enrich, enrich

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.enricher.MIEnricher

enrich, enrich

Constructor Detail

FullPolymerEnricher

public FullPolymerEnricher()

Constructor for FullPolymerEnricher.

FullPolymerEnricher

public FullPolymerEnricher(InteractorFetcher<T> fetcher)

Constructor for FullPolymerEnricher.

Parameters:

fetcher - a InteractorFetcher object.

Method Detail

processOtherProperties

protected void processOtherProperties(T polymerToEnrich,
                                      T fetched)

processOtherProperties.

Overrides:

processOtherProperties in class AbstractInteractorEnricher<T extends Polymer>

Parameters:

polymerToEnrich - a T object.

fetched - a T object.