Package psidev.psi.mi.jami.bridges.fetcher

Interface InteractorFetcher<I extends Interactor>

All Known Subinterfaces:

BioactiveEntityFetcher, GeneFetcher, ProteinFetcher

All Known Implementing Classes:

CachedChebiFetcher, CachedUniprotGeneFetcher, CachedUniprotProteinFetcher, ChebiFetcher, FailingBioactiveEntityFetcher, FailingGeneFetcher, FailingProteinFetcher, MockBioactiveEntityFetcher, MockGeneFetcher, MockProteinFetcher, UniprotGeneFetcher, UniprotProteinFetcher

public interface InteractorFetcher<I extends Interactor>

Fetches the complete records which match an interactor.

Since:

14/05/13

Author:

Gabriel Aldam (galdam@ebi.ac.uk)

Method Summary

Modifier and Type	Method	Description
Collection<I>	fetchByIdentifier(String identifier)	Takes a string identifier and returns the interactors which match.
Collection<I>	fetchByIdentifiers(Collection<String> identifiers)	Takes a collection of string identifiers and returns the interactors which match.

Method Detail

fetchByIdentifier

Collection<I> fetchByIdentifier(String identifier)
                         throws BridgeFailedException

Takes a string identifier and returns the interactors which match. Returns an empty collection of no entries are returned

Parameters:

identifier - The identifier to search for.

Returns:

The proteins which match the search term. Empty if no matches.

Throws:

BridgeFailedException - A problem has been encountered when contacting the service

fetchByIdentifiers

Collection<I> fetchByIdentifiers(Collection<String> identifiers)
                          throws BridgeFailedException

Takes a collection of string identifiers and returns the interactors which match. Returns an empty collection of no entries are returned.

Parameters:

identifiers - The identifiers to search for.

Returns:

The proteins which match the search term. Empty if no matches.

Throws:

BridgeFailedException - if any.