Package psidev.psi.mi.jami.enricher.impl.full

Class FullPolymerUpdater<T extends Polymer>

java.lang.Object

psidev.psi.mi.jami.enricher.impl.AbstractMIEnricher<T>

psidev.psi.mi.jami.enricher.impl.AbstractInteractorEnricher<T>

psidev.psi.mi.jami.enricher.impl.AbstractInteractorUpdater<T>

psidev.psi.mi.jami.enricher.impl.full.FullInteractorBaseUpdater<T>

psidev.psi.mi.jami.enricher.impl.full.FullPolymerUpdater<T>

All Implemented Interfaces:

InteractorEnricher<T>, MIEnricher<T>

public class FullPolymerUpdater<T extends Polymer>
extends FullInteractorBaseUpdater<T>

Full updater of polymer - update all properties of interactor as described in FullInteractorBaseUpdater - update sequence of polymer. If the sequence of the polymer to enrich is different from the one of the fetched polymer, it will enrich it with the sequence of the fetched polymer

Since:

30/01/14

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
FullPolymerUpdater()	Constructor for FullPolymerUpdater.
FullPolymerUpdater(InteractorFetcher<T> fetcher)	Constructor for FullPolymerUpdater.

Method Summary

Modifier and Type	Method	Description
protected void	processOtherProperties(T polymerToUpdate, T fetched)	processOtherProperties.

Methods inherited from class psidev.psi.mi.jami.enricher.impl.full.FullInteractorBaseUpdater

isFullEnrichment

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractInteractorUpdater

canEnrichInteractor, find, getInteractorEnricher, getListener, onCompletedEnrichment, onEnrichedVersionNotFound, onInteractorCheckFailure, processAliases, processAnnotations, processChecksums, processFullName, processIdentifiers, processInteractorType, processOrganism, processShortLabel, processXrefs, setListener

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractInteractorEnricher

enrich, getCvTermEnricher, getInteractorFetcher, getOrganismEnricher, getRetryCount, processInteractorType, processOrganism, setCvTermEnricher, setOrganismEnricher, setRetryCount

Methods inherited from class psidev.psi.mi.jami.enricher.impl.AbstractMIEnricher

enrich, enrich

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.enricher.MIEnricher

enrich, enrich

Constructor Detail

FullPolymerUpdater

public FullPolymerUpdater()

Constructor for FullPolymerUpdater.

FullPolymerUpdater

public FullPolymerUpdater(InteractorFetcher<T> fetcher)

Constructor for FullPolymerUpdater.

Parameters:

fetcher - a InteractorFetcher object.

Method Detail

processOtherProperties

protected void processOtherProperties(T polymerToUpdate,
                                      T fetched)

processOtherProperties.

Overrides:

processOtherProperties in class AbstractInteractorEnricher<T extends Polymer>

Parameters:

polymerToUpdate - a T object.

fetched - a T object.