Package psidev.psi.mi.jami.model

Interface NamedParticipant<I extends Interaction,F extends Feature>

All Superinterfaces:

Entity<F>, Participant<I,F>

All Known Subinterfaces:

ExtendedPsiXmlParticipant<I,F>, ExtendedPsiXmlParticipantEvidence

All Known Implementing Classes:

AbstractParticipantRef, AbstractParticipantRef, AbstractParticipantRef, AbstractXmlParticipant, AbstractXmlParticipant, AbstractXmlParticipant, AbstractXmlParticipantPool, AbstractXmlParticipantPool, AbstractXmlParticipantPool, DefaultNamedModelledParticipant, DefaultNamedParticipant, DefaultNamedParticipantEvidence, XmlExperimentalParticipantPool, XmlExperimentalParticipantPool, XmlExperimentalParticipantPool, XmlExperimentalParticipantPoolWrapper, XmlExperimentalParticipantPoolWrapper, XmlExperimentalParticipantPoolWrapper, XmlModelledParticipant, XmlModelledParticipant, XmlModelledParticipant, XmlModelledParticipantPool, XmlModelledParticipantPool, XmlModelledParticipantPool, XmlParticipant, XmlParticipant, XmlParticipant, XmlParticipantEvidence, XmlParticipantEvidence, XmlParticipantEvidence, XmlParticipantEvidenceWrapper, XmlParticipantEvidenceWrapper, XmlParticipantEvidenceWrapper, XmlParticipantPoolWrapper, XmlParticipantPoolWrapper, XmlParticipantPoolWrapper, XmlParticipantWrapper, XmlParticipantWrapper, XmlParticipantWrapper

public interface NamedParticipant<I extends Interaction,F extends Feature>
extends Participant<I,F>

A named entity is an entity having a short name and a fullname in addition to aliases. The shortname is used for displaying the entity and the fullname is the description of the entity.

Since:

13/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary

Fields inherited from interface psidev.psi.mi.jami.model.Participant

ACCEPTOR_ROLE, ACCEPTOR_ROLE_MI, BAIT_ROLE, BAIT_ROLE_MI, DONOR_ROLE, DONOR_ROLE_MI, ELECTRON_ACCEPTOR_ROLE, ELECTRON_ACCEPTOR_ROLE_MI, ELECTRON_DONOR_ROLE, ELECTRON_DONOR_ROLE_MI, ENZYME_REGULATOR_ROLE, ENZYME_REGULATOR_ROLE_MI, ENZYME_ROLE, ENZYME_ROLE_MI, ENZYME_TARGET_ROLE, ENZYME_TARGET_ROLE_MI, FLUORESCENCE_ACCEPTOR_ROLE, FLUORESCENCE_ACCEPTOR_ROLE_MI, FLUORESCENCE_DONOR_ROLE, FLUORESCENCE_DONOR_ROLE_MI, INHIBITED, INHIBITED_MI, INHIBITOR, INHIBITOR_MI, NEUTRAL, NEUTRAL_MI, PHOSPHATE_ACCEPTOR_ROLE, PHOSPHATE_ACCEPTOR_ROLE_MI, PHOSPHATE_DONOR_ROLE, PHOSPHATE_DONOR_ROLE_MI, PHOTON_ACCEPTOR_ROLE, PHOTON_ACCEPTOR_ROLE_MI, PHOTON_DONOR_ROLE, PHOTON_DONOR_ROLE_MI, PREDETERMINED, PREDETERMINED_MI, PREY, PREY_MI, PUTATIVE_SELF_ROLE, PUTATIVE_SELF_ROLE_MI, SELF_ROLE, SELF_ROLE_MI, SUPPRESSED_GENE_ROLE, SUPPRESSED_GENE_ROLE_MI, SUPPRESSOR_GENE_ROLE, SUPPRESSOR_GENE_ROLE_MI, UNSPECIFIED_ROLE, UNSPECIFIED_ROLE_MI

Method Summary

Modifier and Type	Method	Description
String	getFullName()	The full name of the entity.
String	getShortName()	The short name of the entity.
void	setFullName(String name)	Sets the full name of the entity
void	setShortName(String name)	Sets the short name of an entity

Methods inherited from interface psidev.psi.mi.jami.model.Entity

addAllFeatures, addFeature, getCausalRelationships, getChangeListener, getFeatures, getInteractor, getStoichiometry, removeAllFeatures, removeFeature, setChangeListener, setInteractor, setStoichiometry, setStoichiometry

Methods inherited from interface psidev.psi.mi.jami.model.Participant

getAliases, getAnnotations, getBiologicalEffect, getBiologicalRole, getInteraction, getXrefs, setBiologicalEffect, setBiologicalRole, setInteraction, setInteractionAndAddParticipant

Method Detail

getShortName

String getShortName()

The short name of the entity. It can be null or empty.

Returns:

the short name

setShortName

void setShortName(String name)

Sets the short name of an entity

Parameters:

name - : short name

getFullName

String getFullName()

The full name of the entity. It can be null

Returns:

the full name

setFullName

void setFullName(String name)

Sets the full name of the entity

Parameters:

name - : full name