Interface ExtendedPsiXmlParticipantEvidence
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- All Superinterfaces:
Entity<FeatureEvidence>
,ExperimentalEntity
,ExtendedPsiXmlEntity<FeatureEvidence>
,ExtendedPsiXmlParticipant<InteractionEvidence,FeatureEvidence>
,NamedParticipant<InteractionEvidence,FeatureEvidence>
,Participant<InteractionEvidence,FeatureEvidence>
,ParticipantEvidence
- All Known Implementing Classes:
XmlParticipantEvidence
,XmlParticipantEvidence
,XmlParticipantEvidence
public interface ExtendedPsiXmlParticipantEvidence extends ExtendedPsiXmlParticipant<InteractionEvidence,FeatureEvidence>, ParticipantEvidence
Extended participant evidence for PSI-XML 2,5 standards- Since:
30/10/13
- Version:
- $Id$
- Author:
- Marine Dumousseau (marine@ebi.ac.uk)
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Field Summary
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Fields inherited from interface psidev.psi.mi.jami.model.Participant
ACCEPTOR_ROLE, ACCEPTOR_ROLE_MI, BAIT_ROLE, BAIT_ROLE_MI, DONOR_ROLE, DONOR_ROLE_MI, ELECTRON_ACCEPTOR_ROLE, ELECTRON_ACCEPTOR_ROLE_MI, ELECTRON_DONOR_ROLE, ELECTRON_DONOR_ROLE_MI, ENZYME_REGULATOR_ROLE, ENZYME_REGULATOR_ROLE_MI, ENZYME_ROLE, ENZYME_ROLE_MI, ENZYME_TARGET_ROLE, ENZYME_TARGET_ROLE_MI, FLUORESCENCE_ACCEPTOR_ROLE, FLUORESCENCE_ACCEPTOR_ROLE_MI, FLUORESCENCE_DONOR_ROLE, FLUORESCENCE_DONOR_ROLE_MI, INHIBITED, INHIBITED_MI, INHIBITOR, INHIBITOR_MI, NEUTRAL, NEUTRAL_MI, PHOSPHATE_ACCEPTOR_ROLE, PHOSPHATE_ACCEPTOR_ROLE_MI, PHOSPHATE_DONOR_ROLE, PHOSPHATE_DONOR_ROLE_MI, PHOTON_ACCEPTOR_ROLE, PHOTON_ACCEPTOR_ROLE_MI, PHOTON_DONOR_ROLE, PHOTON_DONOR_ROLE_MI, PREDETERMINED, PREDETERMINED_MI, PREY, PREY_MI, PUTATIVE_SELF_ROLE, PUTATIVE_SELF_ROLE_MI, SELF_ROLE, SELF_ROLE_MI, SUPPRESSED_GENE_ROLE, SUPPRESSED_GENE_ROLE_MI, SUPPRESSOR_GENE_ROLE, SUPPRESSOR_GENE_ROLE_MI, UNSPECIFIED_ROLE, UNSPECIFIED_ROLE_MI
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description List<AbstractExperimentalInteractor>
getExperimentalInteractors()
getExperimentalInteractors.List<CvTerm>
getExperimentalRoles()
getExperimentalRoles.List<Organism>
getHostOrganisms()
getHostOrganisms.-
Methods inherited from interface psidev.psi.mi.jami.model.Entity
addAllFeatures, addFeature, getCausalRelationships, getChangeListener, getFeatures, getInteractor, getStoichiometry, removeAllFeatures, removeFeature, setChangeListener, setInteractor, setStoichiometry, setStoichiometry
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Methods inherited from interface psidev.psi.mi.jami.xml.model.extension.ExtendedPsiXmlEntity
getId, setId
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Methods inherited from interface psidev.psi.mi.jami.model.NamedParticipant
getFullName, getShortName, setFullName, setShortName
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Methods inherited from interface psidev.psi.mi.jami.model.Participant
getAliases, getAnnotations, getBiologicalEffect, getBiologicalRole, getInteraction, getXrefs, setBiologicalEffect, setBiologicalRole, setInteraction, setInteractionAndAddParticipant
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Methods inherited from interface psidev.psi.mi.jami.model.ParticipantEvidence
getConfidences, getExperimentalPreparations, getExperimentalRole, getExpressedInOrganism, getIdentificationMethods, getParameters, setExperimentalRole, setExpressedInOrganism
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Method Detail
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getExperimentalInteractors
List<AbstractExperimentalInteractor> getExperimentalInteractors()
getExperimentalInteractors.
- Returns:
- a
List
object.
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