Uses of Class
psidev.psi.mi.jami.model.impl.DefaultMolecule

Packages that use DefaultMolecule

Package	Description
psidev.psi.mi.jami.crosslink.extension
psidev.psi.mi.jami.model.impl
psidev.psi.mi.jami.tab.extension
psidev.psi.mi.jami.xml.model.extension.xml253
psidev.psi.mi.jami.xml.model.extension.xml254
psidev.psi.mi.jami.xml.model.extension.xml300

Uses of DefaultMolecule in psidev.psi.mi.jami.crosslink.extension

Subclasses of DefaultMolecule in psidev.psi.mi.jami.crosslink.extension

Modifier and Type	Class	Description
class	CsvProtein	Crosslink CSV extension of Protein.

Uses of DefaultMolecule in psidev.psi.mi.jami.model.impl

Subclasses of DefaultMolecule in psidev.psi.mi.jami.model.impl

Modifier and Type	Class	Description
class	DefaultBioactiveEntity	Default implementation for bioactive entity Notes: The equals and hashcode methods have NOT been overridden because the BioactiveEntity object is a complex object.
class	DefaultGene	Default implementation for gene Notes: The equals and hashcode methods have NOT been overridden because the Gene object is a complex object.
class	DefaultNucleicAcid	Default implementation for NucleicAcid.
class	DefaultPolymer	Default implementation for Polymer Notes: The equals and hashcode methods have NOT been overridden because the Polymer object is a complex object.
class	DefaultProtein	Default implementation for proteins and peptides Notes: The equals and hashcode methods have NOT been overridden because the Protein object is a complex object.

Uses of DefaultMolecule in psidev.psi.mi.jami.tab.extension

Subclasses of DefaultMolecule in psidev.psi.mi.jami.tab.extension

Modifier and Type	Class	Description
class	MitabBioactiveEntity	Mitab extension for BioactiveEntity.
class	MitabGene	Mitab extension for Gene.
class	MitabMolecule	Mitab extension for Molecule
class	MitabNucleicAcid	Mitab extension for NucleicAcid It will contain a FileSourceLocator
class	MitabPolymer	Mitab extension of Polymer.
class	MitabProtein	Mitab extension of Protein.

Uses of DefaultMolecule in psidev.psi.mi.jami.xml.model.extension.xml253

Subclasses of DefaultMolecule in psidev.psi.mi.jami.xml.model.extension.xml253

Modifier and Type	Class	Description
class	XmlBioactiveEntity	Xml implementation of BioactiveEntity
class	XmlGene	Xml implementation of a Gene
class	XmlNucleicAcid	Xml implementation of Nucleic acid
class	XmlProtein	Xml implementation of protein

Uses of DefaultMolecule in psidev.psi.mi.jami.xml.model.extension.xml254

Subclasses of DefaultMolecule in psidev.psi.mi.jami.xml.model.extension.xml254

Modifier and Type	Class	Description
class	XmlBioactiveEntity	Xml implementation of BioactiveEntity
class	XmlGene	Xml implementation of a Gene
class	XmlNucleicAcid	Xml implementation of Nucleic acid
class	XmlProtein	Xml implementation of protein

Uses of DefaultMolecule in psidev.psi.mi.jami.xml.model.extension.xml300

Subclasses of DefaultMolecule in psidev.psi.mi.jami.xml.model.extension.xml300

Modifier and Type	Class	Description
class	XmlBioactiveEntity	Xml implementation of BioactiveEntity
class	XmlGene	Xml implementation of a Gene
class	XmlNucleicAcid	Xml implementation of Nucleic acid
class	XmlProtein	Xml implementation of protein