Package psidev.psi.mi.jami.utils.comparator.interaction

Class UnambiguousInteractionComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.interaction.InteractionComparator

psidev.psi.mi.jami.utils.comparator.interaction.UnambiguousInteractionComparator

All Implemented Interfaces:

Comparator<Interaction>

public class UnambiguousInteractionComparator
extends InteractionComparator

Unambiguous Generic interaction comparator. Modelled interactions come first and then experimental interactions - It uses UnambiguousInteractionEvidenceComparator to compare experimental interactions - It uses UnambiguousModelledInteractionComparator to compare modelled interactions - It uses UnambiguousInteractionBaseComparator to compare basic interaction properties

Since:

05/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousInteractionComparator()	Creates a new UnambiguousInteractionComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Interaction interaction1, Interaction interaction2)	Use UnambiguousInteractionComparator to know if two interactions are equals.
int	compare(Interaction interaction1, Interaction interaction2)	Modelled interactions come first, then experimental interactions.
UnambiguousInteractionEvidenceComparator	getExperimentalInteractionComparator()	Getter for the field experimentalInteractionComparator.
UnambiguousInteractionBaseComparator	getInteractionBaseComparator()	Getter for the field interactionBaseComparator.
UnambiguousModelledInteractionComparator	getModelledInteractionComparator()	Getter for the field modelledInteractionComparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousInteractionComparator

public UnambiguousInteractionComparator()

Creates a new UnambiguousInteractionComparator.

Method Detail

getInteractionBaseComparator

public UnambiguousInteractionBaseComparator getInteractionBaseComparator()

Getter for the field interactionBaseComparator.

Overrides:

getInteractionBaseComparator in class InteractionComparator

Returns:

a Comparator object.

getExperimentalInteractionComparator

public UnambiguousInteractionEvidenceComparator getExperimentalInteractionComparator()

Getter for the field experimentalInteractionComparator.

Overrides:

getExperimentalInteractionComparator in class InteractionComparator

Returns:

a InteractionEvidenceComparator object.

getModelledInteractionComparator

public UnambiguousModelledInteractionComparator getModelledInteractionComparator()

Getter for the field modelledInteractionComparator.

Overrides:

getModelledInteractionComparator in class InteractionComparator

Returns:

a ModelledInteractionComparator object.

compare

public int compare(Interaction interaction1,
                   Interaction interaction2)

Modelled interactions come first, then experimental interactions. - It uses InteractionEvidenceComparator to compare experimental interactions - It uses ModelledInteractionComparator to compare modelled interactions - It uses AbstractInteractionBaseComparator to compare basic interaction properties Modelled interactions come first and then experimental interactions - It uses UnambiguousInteractionEvidenceComparator to compare experimental interactions - It uses UnambiguousModelledInteractionComparator to compare modelled interactions - It uses UnambiguousInteractionBaseComparator to compare basic interaction properties

Specified by:

compare in interface Comparator<Interaction>

Overrides:

compare in class InteractionComparator

Parameters:

interaction1 - a Interaction object.

interaction2 - a Interaction object.

Returns:

a int.

areEquals

public static boolean areEquals(Interaction interaction1,
                                Interaction interaction2)

Use UnambiguousInteractionComparator to know if two interactions are equals.

Parameters:

interaction1 - a Interaction object.

interaction2 - a Interaction object.

Returns:

true if the two interactions are equal