Package psidev.psi.mi.jami.utils.comparator.participant

Class ModelledParticipantPoolComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.participant.ModelledParticipantPoolComparator

All Implemented Interfaces:

Comparator<ModelledParticipantPool>

Direct Known Subclasses:

UnambiguousExactModelledParticipantPoolComparator, UnambiguousModelledParticipantPoolComparator

public class ModelledParticipantPoolComparator
extends Object
implements Comparator<ModelledParticipantPool>

Basic biological participant pool comparator. It will compare the basic properties of a biological participant pool using ParticipantBaseComparator. Then features will be compared with ModelledFeatureComparator. All the participant candidates will be compared using ModelledEntityComparator This comparator will ignore all the other properties of a biological participant.

Since:

13/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
ModelledParticipantPoolComparator(ParticipantBaseComparator participantBaseComparator, CollectionComparator<ModelledFeature> featureComparator, CollectionComparator<ModelledEntity> entityComparator)	Creates a new ComponentComparator
ModelledParticipantPoolComparator(ParticipantBaseComparator participantBaseComparator, ModelledFeatureComparator featureComparator, ModelledEntityComparator entityComparator)	Creates a new ComponentComparator

Method Summary

Modifier and Type	Method	Description
int	compare(ModelledParticipantPool bioParticipant1, ModelledParticipantPool bioParticipant2)	It will compare the basic properties of a biological participant pool using ParticipantBaseComparator.
CollectionComparator<ModelledFeature>	getFeatureCollectionComparator()	Getter for the field featureCollectionComparator.
Comparator<ModelledEntity>	getModelledEntityComparator()	Getter for the field modelledEntityComparator.
ParticipantBaseComparator	getParticipantBaseComparator()	Getter for the field participantBaseComparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

ModelledParticipantPoolComparator

public ModelledParticipantPoolComparator(ParticipantBaseComparator participantBaseComparator,
                                         ModelledFeatureComparator featureComparator,
                                         ModelledEntityComparator entityComparator)

Creates a new ComponentComparator

Parameters:

participantBaseComparator - a ParticipantBaseComparator object.

featureComparator - a ModelledFeatureComparator object.

entityComparator - a ModelledEntityComparator object.

ModelledParticipantPoolComparator

public ModelledParticipantPoolComparator(ParticipantBaseComparator participantBaseComparator,
                                         CollectionComparator<ModelledFeature> featureComparator,
                                         CollectionComparator<ModelledEntity> entityComparator)

Creates a new ComponentComparator

Parameters:

participantBaseComparator - a ParticipantBaseComparator object.

featureComparator - a CollectionComparator object.

entityComparator - a CollectionComparator object.

Method Detail

getModelledEntityComparator

public Comparator<ModelledEntity> getModelledEntityComparator()

Getter for the field modelledEntityComparator.

Returns:

a Comparator object.

getParticipantBaseComparator

public ParticipantBaseComparator getParticipantBaseComparator()

Getter for the field participantBaseComparator.

Returns:

a ParticipantBaseComparator object.

getFeatureCollectionComparator

public CollectionComparator<ModelledFeature> getFeatureCollectionComparator()

Getter for the field featureCollectionComparator.

Returns:

a CollectionComparator object.

compare

public int compare(ModelledParticipantPool bioParticipant1,
                   ModelledParticipantPool bioParticipant2)

It will compare the basic properties of a biological participant pool using ParticipantBaseComparator. Then features will be compared with ModelledFeatureComparator. All the participant candidates will be compared using ModelledEntityComparator This comparator will ignore all the other properties of a biological participant.

Specified by:

compare in interface Comparator<ModelledParticipantPool>

Parameters:

bioParticipant1 - a ModelledParticipantPool object.

bioParticipant2 - a ModelledParticipantPool object.

Returns:

a int.