Package psidev.psi.mi.jami.utils.comparator.participant

Class UnambiguousExactModelledParticipantPoolComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.participant.ModelledParticipantPoolComparator

psidev.psi.mi.jami.utils.comparator.participant.UnambiguousExactModelledParticipantPoolComparator

All Implemented Interfaces:

Comparator<ModelledParticipantPool>

public class UnambiguousExactModelledParticipantPoolComparator
extends ModelledParticipantPoolComparator

unambiguous exact biological participant pool comparator. It will compare the basic properties of a biological participant using UnambiguousExactParticipantBaseComparator.

This comparator will ignore all the other properties of a biological participant.

Since:

13/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousExactModelledParticipantPoolComparator()
UnambiguousExactModelledParticipantPoolComparator(UnambiguousExactEntityBaseComparator interactorComparator)	Constructor for UnambiguousExactModelledParticipantPoolComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(ModelledParticipantPool component1, ModelledParticipantPool component2)	Use UnambiguousExactModelledParticipantComparator to know if two biological participant are equals.
int	compare(ModelledParticipantPool component1, ModelledParticipantPool component2)	It will compare the basic properties of a biological participant pool using ParticipantBaseComparator.
UnambiguousExactModelledEntityComparator	getModelledEntityComparator()	Getter for the field modelledEntityComparator.
UnambiguousExactParticipantBaseComparator	getParticipantBaseComparator()	Getter for the field participantBaseComparator.

Methods inherited from class psidev.psi.mi.jami.utils.comparator.participant.ModelledParticipantPoolComparator

getFeatureCollectionComparator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousExactModelledParticipantPoolComparator

public UnambiguousExactModelledParticipantPoolComparator()

Creates a new UnambiguousExactModelledParticipantPoolComparator. It will use a UnambiguousExactParticipantBaseComparator to compare the basic properties of a participant.

UnambiguousExactModelledParticipantPoolComparator

public UnambiguousExactModelledParticipantPoolComparator(UnambiguousExactEntityBaseComparator interactorComparator)

Constructor for UnambiguousExactModelledParticipantPoolComparator.

Parameters:

interactorComparator - a UnambiguousExactEntityBaseComparator object.

Method Detail

areEquals

public static boolean areEquals(ModelledParticipantPool component1,
                                ModelledParticipantPool component2)

Use UnambiguousExactModelledParticipantComparator to know if two biological participant are equals.

Parameters:

component1 - a ModelledParticipantPool object.

component2 - a ModelledParticipantPool object.

Returns:

true if the two biological participant are equal

getParticipantBaseComparator

public UnambiguousExactParticipantBaseComparator getParticipantBaseComparator()

Getter for the field participantBaseComparator.

Overrides:

getParticipantBaseComparator in class ModelledParticipantPoolComparator

Returns:

a ParticipantBaseComparator object.

getModelledEntityComparator

public UnambiguousExactModelledEntityComparator getModelledEntityComparator()

Getter for the field modelledEntityComparator.

Overrides:

getModelledEntityComparator in class ModelledParticipantPoolComparator

Returns:

a Comparator object.

compare

public int compare(ModelledParticipantPool component1,
                   ModelledParticipantPool component2)

It will compare the basic properties of a biological participant pool using ParticipantBaseComparator. Then features will be compared with ModelledFeatureComparator. All the participant candidates will be compared using ModelledEntityComparator This comparator will ignore all the other properties of a biological participant. It will compare the basic properties of a component using UnambiguousExactParticipantBaseComparator.

This comparator will ignore all the other properties of a component.

Specified by:

compare in interface Comparator<ModelledParticipantPool>

Overrides:

compare in class ModelledParticipantPoolComparator

Parameters:

component1 - a ModelledParticipantPool object.

component2 - a ModelledParticipantPool object.

Returns:

a int.