Package psidev.psi.mi.jami.xml.io.parser

Class XmlModelledBinaryParser

java.lang.Object

psidev.psi.mi.jami.xml.io.parser.AbstractPsixmlBinaryParser<ModelledInteraction,ModelledBinaryInteraction>

psidev.psi.mi.jami.xml.io.parser.XmlModelledBinaryParser

All Implemented Interfaces:

PsiXmlParser<ModelledBinaryInteraction>

public class XmlModelledBinaryParser
extends AbstractPsixmlBinaryParser<ModelledInteraction,ModelledBinaryInteraction>

Xml parser creating modelled binary interaction

Since:

16/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
XmlModelledBinaryParser(File file)	Constructor for XmlModelledBinaryParser.
XmlModelledBinaryParser(InputStream inputStream)	Constructor for XmlModelledBinaryParser.
XmlModelledBinaryParser(Reader reader)	Constructor for XmlModelledBinaryParser.
XmlModelledBinaryParser(URL url)	Constructor for XmlModelledBinaryParser.

Method Summary

Modifier and Type	Method	Description
protected ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction>	initialiseDefaultExpansionMethod()	initialiseDefaultExpansionMethod.

Methods inherited from class psidev.psi.mi.jami.xml.io.parser.AbstractPsixmlBinaryParser

close, getDelegateParser, getExpansionMethod, getInteractorFactory, getListener, getVersion, hasFinished, instantiateInteractionFactory, parseNextInteraction, reInit, setCacheOfObjects, setExpansionMethod, setInteractorFactory, setListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

XmlModelledBinaryParser

public XmlModelledBinaryParser(File file)
                        throws FileNotFoundException,
                               XMLStreamException,
                               javax.xml.bind.JAXBException

Constructor for XmlModelledBinaryParser.

Parameters:

file - a File object.

Throws:

FileNotFoundException - if any.

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

XmlModelledBinaryParser

public XmlModelledBinaryParser(InputStream inputStream)
                        throws XMLStreamException,
                               javax.xml.bind.JAXBException

Constructor for XmlModelledBinaryParser.

Parameters:

inputStream - a InputStream object.

Throws:

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

XmlModelledBinaryParser

public XmlModelledBinaryParser(URL url)
                        throws IOException,
                               XMLStreamException,
                               javax.xml.bind.JAXBException

Constructor for XmlModelledBinaryParser.

Parameters:

url - a URL object.

Throws:

IOException - if any.

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

XmlModelledBinaryParser

public XmlModelledBinaryParser(Reader reader)
                        throws XMLStreamException,
                               javax.xml.bind.JAXBException

Constructor for XmlModelledBinaryParser.

Parameters:

reader - a Reader object.

Throws:

XMLStreamException - if any.

javax.xml.bind.JAXBException - if any.

Method Detail

initialiseDefaultExpansionMethod

protected ComplexExpansionMethod<ModelledInteraction,ModelledBinaryInteraction> initialiseDefaultExpansionMethod()

initialiseDefaultExpansionMethod.

Specified by:

initialiseDefaultExpansionMethod in class AbstractPsixmlBinaryParser<ModelledInteraction,ModelledBinaryInteraction>

Returns:

a ComplexExpansionMethod object.