Interface PsiXmlStreamSource<I extends Interaction>
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- All Superinterfaces:
ErrorHandler,InteractionStream<I>,MIDataSource,MIFileDataSource,MIFileParserListener,PsiXmlParserListener
- All Known Subinterfaces:
PsiXmlSource<I>
- All Known Implementing Classes:
AbstractPsiXmlBinarySource,AbstractPsiXmlBinaryStream,AbstractPsiXmlSource,AbstractPsiXmlStream,DefaultPsiXmlSource,DefaultPsiXmlStreamSource,LightXmlBinarySource,LightXmlBinaryStreamSource,LightXmlSource,LightXmlStreamSource,XmlBinaryEvidenceSource,XmlBinaryEvidenceStreamSource,XmlBinarySource,XmlBinaryStreamSource,XmlComplexSource,XmlComplexStreamSource,XmlEvidenceSource,XmlEvidenceStreamSource,XmlModelledBinarySource,XmlModelledBinaryStreamSource,XmlModelledSource,XmlModelledStreamSource,XmlSource,XmlStreamSource
public interface PsiXmlStreamSource<I extends Interaction> extends MIFileDataSource, InteractionStream<I>, PsiXmlParserListener, ErrorHandler
Interface for PSI-MI XML datasources that can stream PSI-MI XML files- Since:
02/05/14
- Version:
- $Id$
- Author:
- Marine Dumousseau (marine@ebi.ac.uk)
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Field Summary
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Fields inherited from interface psidev.psi.mi.jami.datasource.MIFileDataSource
FILE_URI_PREFIX, URL_PREFIX_REGEXP
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Method Summary
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Methods inherited from interface org.xml.sax.ErrorHandler
error, fatalError, warning
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Methods inherited from interface psidev.psi.mi.jami.datasource.InteractionStream
getInteractionsIterator
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Methods inherited from interface psidev.psi.mi.jami.datasource.MIDataSource
close, initialiseContext, reset
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Methods inherited from interface psidev.psi.mi.jami.datasource.MIFileDataSource
getFileParserListener, setFileParserListener, validateSyntax, validateSyntax
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Methods inherited from interface psidev.psi.mi.jami.listener.MIFileParserListener
onAliasWithoutName, onAnnotationWithoutTopic, onInteractionWithoutParticipants, onInvalidOrganismTaxid, onInvalidPosition, onInvalidRange, onInvalidStoichiometry, onInvalidSyntax, onMissingChecksumMethod, onMissingChecksumValue, onMissingConfidenceType, onMissingConfidenceValue, onMissingCvTermName, onMissingInteractorName, onMissingParameterType, onMissingParameterValue, onParticipantWithoutInteractor, onSyntaxWarning, onXrefWithoutDatabase, onXrefWithoutId
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Methods inherited from interface psidev.psi.mi.jami.xml.listener.PsiXmlParserListener
onSeveralExperimentalRolesFound, onSeveralExperimentsFound, onSeveralExpressedInOrganismFound, onSeveralHostOrganismFound, onUnresolvedReference
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