Package psidev.psi.mi.jami.enricher.impl.full

Class FullModelledInteractionUpdater<I extends ModelledInteraction>

java.lang.Object

psidev.psi.mi.jami.enricher.impl.minimal.MinimalInteractionEnricher<I>

psidev.psi.mi.jami.enricher.impl.minimal.MinimalModelledInteractionEnricher<I>

psidev.psi.mi.jami.enricher.impl.full.FullModelledInteractionEnricher<I>

psidev.psi.mi.jami.enricher.impl.full.FullModelledInteractionUpdater<I>

All Implemented Interfaces:

InteractionEnricher<I>, MIEnricher<I>, ModelledInteractionEnricher<I>

Direct Known Subclasses:

FullComplexUpdater

public class FullModelledInteractionUpdater<I extends ModelledInteraction>
extends FullModelledInteractionEnricher<I>

Full updater of a modelled interaction

Since:

01/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Modifier	Constructor	Description
	FullModelledInteractionUpdater()	Constructor for FullModelledInteractionUpdater.
protected	FullModelledInteractionUpdater(FullInteractionUpdater<I> interactionEnricher)	Constructor for FullModelledInteractionUpdater.

Method Summary

Modifier and Type	Method	Description
protected void	processConfidences(I objectToEnrich, I objectSource)	processConfidences.
protected void	processCooperativeEffects(I objectToEnrich, I objectSource)	processCooperativeEffects.
protected void	processEvidenceType(I objectToEnrich, I objectSource)	processEvidenceType.
protected void	processInteractionEvidences(I objectToEnrich, I objectSource)	processInteractionEvidences.
protected void	processParameters(I objectToEnrich, I objectSource)	processParameters.
protected void	processSource(I objectToEnrich, I objectSource)	processSource.

Methods inherited from class psidev.psi.mi.jami.enricher.impl.full.FullModelledInteractionEnricher

getCvTermEnricher, getEvidenceEnricher, getInteractionEnricher, getInteractionEnricherListener, getParticipantEnricher, mergeCooperativeEffects, mergeInteractionEvidences, processEvidenceType, processInteractionEvidences, processOtherProperties, processOtherProperties, setCvTermEnricher, setEvidenceEnricher, setInteractionEnricherListener, setParticipantEnricher

Methods inherited from class psidev.psi.mi.jami.enricher.impl.minimal.MinimalModelledInteractionEnricher

getSourceEnricher, processSource, setSourceEnricher

Methods inherited from class psidev.psi.mi.jami.enricher.impl.minimal.MinimalInteractionEnricher

enrich, enrich, enrich, processCreatedDate, processIdentifiers, processInteractionType, processInteractionType, processMinimalUpdates, processParticipants, processParticipants, processShortName, processUpdateDate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface psidev.psi.mi.jami.enricher.MIEnricher

enrich, enrich, enrich

Constructor Detail

FullModelledInteractionUpdater

public FullModelledInteractionUpdater()

Constructor for FullModelledInteractionUpdater.

FullModelledInteractionUpdater

protected FullModelledInteractionUpdater(FullInteractionUpdater<I> interactionEnricher)

Constructor for FullModelledInteractionUpdater.

Parameters:

interactionEnricher - a FullInteractionUpdater object.

Method Detail

processConfidences

protected void processConfidences(I objectToEnrich,
                                  I objectSource)

processConfidences.

Overrides:

processConfidences in class FullModelledInteractionEnricher<I extends ModelledInteraction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

processParameters

protected void processParameters(I objectToEnrich,
                                 I objectSource)

processParameters.

Overrides:

processParameters in class FullModelledInteractionEnricher<I extends ModelledInteraction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

processCooperativeEffects

protected void processCooperativeEffects(I objectToEnrich,
                                         I objectSource)

processCooperativeEffects.

Overrides:

processCooperativeEffects in class FullModelledInteractionEnricher<I extends ModelledInteraction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

processInteractionEvidences

protected void processInteractionEvidences(I objectToEnrich,
                                           I objectSource)
                                    throws EnricherException

processInteractionEvidences.

Overrides:

processInteractionEvidences in class FullModelledInteractionEnricher<I extends ModelledInteraction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.

processSource

protected void processSource(I objectToEnrich,
                             I objectSource)
                      throws EnricherException

processSource.

Overrides:

processSource in class MinimalModelledInteractionEnricher<I extends ModelledInteraction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.

processEvidenceType

protected void processEvidenceType(I objectToEnrich,
                                   I objectSource)
                            throws EnricherException

processEvidenceType.

Overrides:

processEvidenceType in class FullModelledInteractionEnricher<I extends ModelledInteraction>

Parameters:

objectToEnrich - a I object.

objectSource - a I object.

Throws:

EnricherException - if any.