Package psidev.psi.mi.jami.utils.comparator.participant

Class UnambiguousExactEntityComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.participant.EntityComparator

psidev.psi.mi.jami.utils.comparator.participant.UnambiguousExactEntityComparator

All Implemented Interfaces:

Comparator<Entity>

public class UnambiguousExactEntityComparator
extends EntityComparator

Unambiguous exact generic entity comparator Modelled participants come first and then experimental participants. - It uses UnambiguousExactParticipantPoolComparator to compare participant sets - It uses UnambiguousExactModelledParticipantComparator to compare components - It uses UnambiguousExactParticipantEvidenceComparator to compare experimental participants - It uses UnambiguousExactParticipantBaseComparator to compare basic participant properties

Since:

04/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousExactEntityComparator()	Creates a UnambiguousExactParticipantComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Entity participant1, Entity participant2)	Use UnambiguousExactEntityComparator to know if two participants are equals.
int	compare(Entity participant1, Entity participant2)	Modelled participants come first and then experimental participants.
UnambiguousExactModelledEntityComparator	getBiologicalEntityComparator()	Getter for the field biologicalEntityComparator.
UnambiguousExactEntityBaseComparator	getEntityBaseComparator()	Getter for the field entityBaseComparator.
UnambiguousExactExperimentalEntityComparator	getExperimentalEntityComparator()	Getter for the field experimentalEntityComparator.
UnambiguousExactParticipantComparator	getParticipantComparator()	Getter for the field participantComparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousExactEntityComparator

public UnambiguousExactEntityComparator()

Creates a UnambiguousExactParticipantComparator. It will use a UnambiguousExactParticipantBaseComparator to compare basic feature properties

Method Detail

getEntityBaseComparator

public UnambiguousExactEntityBaseComparator getEntityBaseComparator()

Getter for the field entityBaseComparator.

Overrides:

getEntityBaseComparator in class EntityComparator

Returns:

a EntityBaseComparator object.

getExperimentalEntityComparator

public UnambiguousExactExperimentalEntityComparator getExperimentalEntityComparator()

Getter for the field experimentalEntityComparator.

Overrides:

getExperimentalEntityComparator in class EntityComparator

Returns:

a ExperimentalEntityComparator object.

getBiologicalEntityComparator

public UnambiguousExactModelledEntityComparator getBiologicalEntityComparator()

Getter for the field biologicalEntityComparator.

Overrides:

getBiologicalEntityComparator in class EntityComparator

Returns:

a ModelledEntityComparator object.

getParticipantComparator

public UnambiguousExactParticipantComparator getParticipantComparator()

Getter for the field participantComparator.

Overrides:

getParticipantComparator in class EntityComparator

Returns:

a ParticipantComparator object.

compare

public int compare(Entity participant1,
                   Entity participant2)

Description copied from class: EntityComparator

Modelled participants come first and then experimental participants. - It uses ParticipantEvidenceComparator to compare experimental participants - It uses ModelledParticipantComparator to compare biological participants - It uses ParticipantBaseComparator to compare basic participant properties

Specified by:

compare in interface Comparator<Entity>

Overrides:

compare in class EntityComparator

Parameters:

participant1 - a Entity object.

participant2 - a Entity object.

Returns:

a int.

areEquals

public static boolean areEquals(Entity participant1,
                                Entity participant2)

Use UnambiguousExactEntityComparator to know if two participants are equals.

Parameters:

participant1 - a Entity object.

participant2 - a Entity object.

Returns:

true if the two participants are equal