Package psidev.psi.mi.jami.utils.comparator.participant

Class UnambiguousParticipantComparator

java.lang.Object

psidev.psi.mi.jami.utils.comparator.participant.ParticipantComparator

psidev.psi.mi.jami.utils.comparator.participant.UnambiguousParticipantComparator

All Implemented Interfaces:

Comparator<Participant>

public class UnambiguousParticipantComparator
extends ParticipantComparator

Unambiguous generic Participant comparator Modelled participants come first and then experimental participants. - It uses UnambiguousEntityComparator to compare components - It uses UnambiguousModelledParticipantComparator to compare components - It uses UnambiguousParticipantEvidenceComparator to compare experimental participants - It uses UnambiguousParticipantBaseComparator to compare basic participant properties

Since:

04/02/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Constructor Summary

Constructors

Constructor	Description
UnambiguousParticipantComparator()	Creates a UnambiguousParticipantComparator.

Method Summary

Modifier and Type	Method	Description
static boolean	areEquals(Participant participant1, Participant participant2)	Use UnambiguousParticipantComparator to know if two participants are equals.
int	compare(Participant participant1, Participant participant2)	Modelled participants come first and then experimental participants.
UnambiguousModelledParticipantComparator	getBiologicalParticipantComparator()	Getter for the field biologicalParticipantComparator.
UnambiguousParticipantEvidenceComparator	getExperimentalParticipantComparator()	Getter for the field experimentalParticipantComparator.
UnambiguousParticipantBaseComparator	getParticipantBaseComparator()	Getter for the field participantBaseComparator.
UnambiguousParticipantPoolComparator	getPoolComparator()	Getter for the field poolComparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

UnambiguousParticipantComparator

public UnambiguousParticipantComparator()

Creates a UnambiguousParticipantComparator. It will use a UnambiguousParticipantBaseComparator to compare basic feature properties

Method Detail

getParticipantBaseComparator

public UnambiguousParticipantBaseComparator getParticipantBaseComparator()

Getter for the field participantBaseComparator.

Overrides:

getParticipantBaseComparator in class ParticipantComparator

Returns:

a ParticipantBaseComparator object.

getExperimentalParticipantComparator

public UnambiguousParticipantEvidenceComparator getExperimentalParticipantComparator()

Getter for the field experimentalParticipantComparator.

Overrides:

getExperimentalParticipantComparator in class ParticipantComparator

Returns:

a ParticipantEvidenceComparator object.

getBiologicalParticipantComparator

public UnambiguousModelledParticipantComparator getBiologicalParticipantComparator()

Getter for the field biologicalParticipantComparator.

Overrides:

getBiologicalParticipantComparator in class ParticipantComparator

Returns:

a ModelledParticipantComparator object.

getPoolComparator

public UnambiguousParticipantPoolComparator getPoolComparator()

Description copied from class: ParticipantComparator

Getter for the field poolComparator.

Overrides:

getPoolComparator in class ParticipantComparator

Returns:

a ParticipantPoolComparator object.

compare

public int compare(Participant participant1,
                   Participant participant2)

Modelled participants come first and then experimental participants. - It uses UnambiguousEntityComparator to compare components - It uses UnambiguousModelledParticipantComparator to compare components - It uses UnambiguousParticipantEvidenceComparator to compare experimental participants - It uses UnambiguousParticipantBaseComparator to compare basic participant properties

Specified by:

compare in interface Comparator<Participant>

Overrides:

compare in class ParticipantComparator

Parameters:

participant1 - a Participant object.

participant2 - a Participant object.

Returns:

a int.

areEquals

public static boolean areEquals(Participant participant1,
                                Participant participant2)

Use UnambiguousParticipantComparator to know if two participants are equals.

Parameters:

participant1 - a Participant object.

participant2 - a Participant object.

Returns:

true if the two participants are equal