Package psidev.psi.mi.jami.model

Interface NamedExperiment

All Superinterfaces:

Experiment

All Known Subinterfaces:

ExtendedPsiXmlExperiment

All Known Implementing Classes:

AbstractExperimentRef, AbstractExperimentRef, AbstractExperimentRef, AbstractXmlExperiment, AbstractXmlExperiment, AbstractXmlExperiment, DefaultNamedExperiment, DefaultXmlExperiment, DefaultXmlExperiment, DefaultXmlExperiment, XmlExperiment, XmlExperiment, XmlExperiment

public interface NamedExperiment
extends Experiment

A named experiment is an experiment with a shortname, fullname and aliases

Since:

13/11/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Field Summary

Fields inherited from interface psidev.psi.mi.jami.model.Experiment

INFERRED_BY_CURATOR, INFERRED_BY_CURATOR_MI, UNSPECIFIED_METHOD, UNSPECIFIED_METHOD_MI

Method Summary

Modifier and Type	Method	Description
<A extends Alias> Collection<A>	getAliases()	Collection of aliases for an experiment.
String	getFullName()	The full name of the experiment.
String	getShortName()	The short name of the experiment.
void	setFullName(String name)	Sets the full name of the experiment
void	setShortName(String name)	Sets the short name of an experiment

Methods inherited from interface psidev.psi.mi.jami.model.Experiment

addAllInteractionEvidences, addAllVariableParameters, addInteractionEvidence, addVariableParameter, getAnnotations, getConfidences, getHostOrganism, getInteractionDetectionMethod, getInteractionEvidences, getPublication, getVariableParameters, getXrefs, removeAllInteractionEvidences, removeAllVariableParameters, removeInteractionEvidence, removeVariableParameter, setHostOrganism, setInteractionDetectionMethod, setPublication, setPublicationAndAddExperiment

Method Detail

getShortName

String getShortName()

The short name of the experiment. It can be null or empty. Ex: author-2013-1

Returns:

the short name

setShortName

void setShortName(String name)

Sets the short name of an experiment

Parameters:

name - : short name

getFullName

String getFullName()

The full name of the experiment. It can be null Ex: publication title, experiment description

Returns:

the full name

setFullName

void setFullName(String name)

Sets the full name of the experiment

Parameters:

name - : full name

getAliases

<A extends Alias> Collection<A> getAliases()

Collection of aliases for an experiment. The Collection cannot be null and if the experiment does not have any aliases, the method should return an empty Collection.

Type Parameters:

A - an A object

Returns:

the aliases