Uses of Interface
psidev.psi.mi.jami.model.NucleicAcid

Packages that use NucleicAcid

Package	Description
psidev.psi.mi.jami.factory
psidev.psi.mi.jami.model.impl
psidev.psi.mi.jami.tab.extension
psidev.psi.mi.jami.utils
psidev.psi.mi.jami.utils.comparator.interactor
psidev.psi.mi.jami.xml.model.extension.factory
psidev.psi.mi.jami.xml.model.extension.xml253
psidev.psi.mi.jami.xml.model.extension.xml254
psidev.psi.mi.jami.xml.model.extension.xml300

Uses of NucleicAcid in psidev.psi.mi.jami.factory

Methods in psidev.psi.mi.jami.factory that return NucleicAcid

Modifier and Type	Method	Description
NucleicAcid	DefaultInteractorFactory.createNucleicAcid(String name, CvTerm type)	Creates a new NucleicAcid with the name and interactor type
NucleicAcid	InteractorFactory.createNucleicAcid(String name, CvTerm type)	Creates a new NucleicAcid with the name and interactor type

Uses of NucleicAcid in psidev.psi.mi.jami.model.impl

Classes in psidev.psi.mi.jami.model.impl that implement NucleicAcid

Modifier and Type	Class	Description
class	DefaultNucleicAcid	Default implementation for NucleicAcid.

Uses of NucleicAcid in psidev.psi.mi.jami.tab.extension

Classes in psidev.psi.mi.jami.tab.extension that implement NucleicAcid

Modifier and Type	Class	Description
class	MitabNucleicAcid	Mitab extension for NucleicAcid It will contain a FileSourceLocator

Uses of NucleicAcid in psidev.psi.mi.jami.utils

Methods in psidev.psi.mi.jami.utils that return NucleicAcid

Modifier and Type	Method	Description
static NucleicAcid	InteractorUtils.createNucleicAcidDdbjEmblGenbank(String name, String identity)	createNucleicAcidDdbjEmblGenbank
static NucleicAcid	InteractorUtils.createNucleicAcidRefseq(String name, String identity)	createNucleicAcidRefseq

Uses of NucleicAcid in psidev.psi.mi.jami.utils.comparator.interactor

Methods in psidev.psi.mi.jami.utils.comparator.interactor that return types with arguments of type NucleicAcid

Modifier and Type	Method	Description
Comparator<NucleicAcid>	InteractorComparator.getNucleicAcidComparator()	Getter for the field nucleicAcidComparator.

Methods in psidev.psi.mi.jami.utils.comparator.interactor with parameters of type NucleicAcid

Modifier and Type	Method	Description
static boolean	DefaultExactNucleicAcidComparator.areEquals(NucleicAcid nucleicAcid1, NucleicAcid nucleicAcid2)	Use DefaultNucleicAcidComparator to know if two nucleic acids are equals.
static boolean	DefaultNucleicAcidComparator.areEquals(NucleicAcid nucleicAcid1, NucleicAcid nucleicAcid2)	Use DefaultNucleicAcidComparator to know if two nucleic acids are equals.
static boolean	UnambiguousExactNucleicAcidComparator.areEquals(NucleicAcid nucleicAcid1, NucleicAcid nucleicAcid2)	Use UnambiguousExactNucleicAcidComparator to know if two nucleic acids are equals.
static boolean	UnambiguousNucleicAcidComparator.areEquals(NucleicAcid nucleicAcid1, NucleicAcid nucleicAcid2)	Use UnambiguousNucleicAcidComparator to know if two nucleic acids are equals.
int	NucleicAcidComparator.compare(NucleicAcid nucleicAcid1, NucleicAcid nucleicAcid2)	It will first use UnambiguousPolymerComparator to compare the basic interactor properties.
int	UnambiguousExactNucleicAcidComparator.compare(NucleicAcid nucleicAcid1, NucleicAcid nucleicAcid2)

Uses of NucleicAcid in psidev.psi.mi.jami.xml.model.extension.factory

Methods in psidev.psi.mi.jami.xml.model.extension.factory that return NucleicAcid

Modifier and Type	Method	Description
NucleicAcid	XmlInteractorFactory.createNucleicAcid(String name, CvTerm type)	Creates a new NucleicAcid with the name and interactor type

Uses of NucleicAcid in psidev.psi.mi.jami.xml.model.extension.xml253

Classes in psidev.psi.mi.jami.xml.model.extension.xml253 that implement NucleicAcid

Modifier and Type	Class	Description
class	XmlNucleicAcid	Xml implementation of Nucleic acid

Uses of NucleicAcid in psidev.psi.mi.jami.xml.model.extension.xml254

Classes in psidev.psi.mi.jami.xml.model.extension.xml254 that implement NucleicAcid

Modifier and Type	Class	Description
class	XmlNucleicAcid	Xml implementation of Nucleic acid

Uses of NucleicAcid in psidev.psi.mi.jami.xml.model.extension.xml300

Classes in psidev.psi.mi.jami.xml.model.extension.xml300 that implement NucleicAcid

Modifier and Type	Class	Description
class	XmlNucleicAcid	Xml implementation of Nucleic acid