Uses of Interface
psidev.psi.mi.jami.model.ModelledConfidence

Packages that use ModelledConfidence

Package	Description
psidev.psi.mi.jami.binary.impl
psidev.psi.mi.jami.model
psidev.psi.mi.jami.model.impl
psidev.psi.mi.jami.tab.extension
psidev.psi.mi.jami.xml.model.extension.binary
psidev.psi.mi.jami.xml.model.extension.binary.xml30
psidev.psi.mi.jami.xml.model.extension.xml253
psidev.psi.mi.jami.xml.model.extension.xml254
psidev.psi.mi.jami.xml.model.extension.xml300
psidev.psi.mi.jami.xml.model.reference.xml253
psidev.psi.mi.jami.xml.model.reference.xml254
psidev.psi.mi.jami.xml.model.reference.xml300

Uses of ModelledConfidence in psidev.psi.mi.jami.binary.impl

Methods in psidev.psi.mi.jami.binary.impl that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	DefaultModelledBinaryInteraction.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	ModelledBinaryInteractionWrapper.getModelledConfidences()	getModelledConfidences

Method parameters in psidev.psi.mi.jami.binary.impl with type arguments of type ModelledConfidence

Modifier and Type	Method	Description
protected void	DefaultModelledBinaryInteraction.initialiseModelledConfidencesWith(Collection<ModelledConfidence> confidences)	initialiseModelledConfidencesWith

Uses of ModelledConfidence in psidev.psi.mi.jami.model

Methods in psidev.psi.mi.jami.model with type parameters of type ModelledConfidence

Modifier and Type	Method	Description
<C extends ModelledConfidence> Collection<C>	ModelledInteraction.getModelledConfidences()	The confidences in this interaction.

Uses of ModelledConfidence in psidev.psi.mi.jami.model.impl

Classes in psidev.psi.mi.jami.model.impl that implement ModelledConfidence

Modifier and Type	Class	Description
class	DefaultModelledConfidence	Default implementation for ModelledInteraction Notes: The equals and hashcode methods have been overridden to be consistent with UnambiguousConfidenceComparator

Methods in psidev.psi.mi.jami.model.impl that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	DefaultComplex.getModelledConfidences()	getModelledConfidences
Collection<ModelledConfidence>	DefaultModelledInteraction.getModelledConfidences()	Getter for the field modelledConfidences.

Method parameters in psidev.psi.mi.jami.model.impl with type arguments of type ModelledConfidence

Modifier and Type	Method	Description
protected void	DefaultComplex.initialiseConfidencesWith(Collection<ModelledConfidence> confidences)	initialiseConfidencesWith
protected void	DefaultModelledInteraction.initialiseModelledConfidencesWith(Collection<ModelledConfidence> confidences)	initialiseModelledConfidencesWith

Uses of ModelledConfidence in psidev.psi.mi.jami.tab.extension

Classes in psidev.psi.mi.jami.tab.extension that implement ModelledConfidence

Modifier and Type	Class	Description
class	MitabConfidence	A MitabConfidence is a confidence with some text

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.extension.binary

Methods in psidev.psi.mi.jami.xml.model.extension.binary that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	XmlModelledBinaryInteraction.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlModelledBinaryInteractionWrapper.getModelledConfidences()	The confidences in this interaction.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.extension.binary.xml30

Methods in psidev.psi.mi.jami.xml.model.extension.binary.xml30 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	XmlModelledBinaryInteraction.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlModelledBinaryInteractionWrapper.getModelledConfidences()	The confidences in this interaction.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.extension.xml253

Classes in psidev.psi.mi.jami.xml.model.extension.xml253 that implement ModelledConfidence

Modifier and Type	Class	Description
class	XmlConfidenceWrapper	A wrapper for confidences
class	XmlModelledConfidence	Xml implementation of ModelledConfidence

Methods in psidev.psi.mi.jami.xml.model.extension.xml253 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
List<ModelledConfidence>	AbstractXmlModelledInteraction.JAXBConfidenceWrapper.getJAXBConfidences()
Collection<ModelledConfidence>	AbstractXmlModelledInteraction.getModelledConfidences()	getModelledConfidences.
Collection<ModelledConfidence>	XmlBasicInteractionComplexWrapper.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlInteractionEvidenceComplexWrapper.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlModelledInteractionComplexWrapper.getModelledConfidences()	getModelledConfidences.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.extension.xml254

Classes in psidev.psi.mi.jami.xml.model.extension.xml254 that implement ModelledConfidence

Modifier and Type	Class	Description
class	XmlConfidenceWrapper	A wrapper for confidences
class	XmlModelledConfidence	Xml implementation of ModelledConfidence

Methods in psidev.psi.mi.jami.xml.model.extension.xml254 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
List<ModelledConfidence>	AbstractXmlModelledInteraction.JAXBConfidenceWrapper.getJAXBConfidences()
Collection<ModelledConfidence>	AbstractXmlModelledInteraction.getModelledConfidences()	getModelledConfidences.
Collection<ModelledConfidence>	XmlBasicInteractionComplexWrapper.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlInteractionEvidenceComplexWrapper.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlModelledInteractionComplexWrapper.getModelledConfidences()	getModelledConfidences.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.extension.xml300

Classes in psidev.psi.mi.jami.xml.model.extension.xml300 that implement ModelledConfidence

Modifier and Type	Class	Description
class	XmlConfidenceWrapper	A wrapper for confidences
class	XmlModelledConfidence	Xml 3.0 implementation of ModelledConfidence

Methods in psidev.psi.mi.jami.xml.model.extension.xml300 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
List<ModelledConfidence>	AbstractXmlModelledInteraction.JAXBConfidenceWrapper.getJAXBConfidences()
List<ModelledConfidence>	XmlModelledInteraction.JAXBConfidenceWrapper.getJAXBConfidences()
Collection<ModelledConfidence>	AbstractXmlModelledInteraction.getModelledConfidences()	getModelledConfidences.
Collection<ModelledConfidence>	XmlBasicInteractionComplexWrapper.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlInteractionEvidenceComplexWrapper.getModelledConfidences()	Getter for the field modelledConfidences.
Collection<ModelledConfidence>	XmlModelledInteraction.getModelledConfidences()	getModelledConfidences.
Collection<ModelledConfidence>	XmlModelledInteractionComplexWrapper.getModelledConfidences()	getModelledConfidences.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.reference.xml253

Methods in psidev.psi.mi.jami.xml.model.reference.xml253 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	AbstractComplexRef.getModelledConfidences()	getModelledConfidences.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.reference.xml254

Methods in psidev.psi.mi.jami.xml.model.reference.xml254 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	AbstractComplexRef.getModelledConfidences()	getModelledConfidences.

Uses of ModelledConfidence in psidev.psi.mi.jami.xml.model.reference.xml300

Methods in psidev.psi.mi.jami.xml.model.reference.xml300 that return types with arguments of type ModelledConfidence

Modifier and Type	Method	Description
Collection<ModelledConfidence>	AbstractComplexRef.getModelledConfidences()	getModelledConfidences.