Uses of Interface
psidev.psi.mi.jami.listener.AliasesChangeListener

Packages that use AliasesChangeListener

Package	Description
psidev.psi.mi.jami.enricher
psidev.psi.mi.jami.enricher.impl.full
psidev.psi.mi.jami.enricher.impl.minimal
psidev.psi.mi.jami.enricher.listener
psidev.psi.mi.jami.enricher.listener.impl
psidev.psi.mi.jami.enricher.listener.impl.log
psidev.psi.mi.jami.enricher.listener.impl.writer
psidev.psi.mi.jami.enricher.util
psidev.psi.mi.jami.listener
psidev.psi.mi.jami.listener.impl

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher

Subinterfaces of AliasesChangeListener in psidev.psi.mi.jami.enricher

Modifier and Type	Interface	Description
interface	ProteinListeningFeatureEnricher<F extends Feature>	An extension to the feature enricher, the protein listening form also updates ranges.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.impl.full

Classes in psidev.psi.mi.jami.enricher.impl.full that implement AliasesChangeListener

Modifier and Type	Class	Description
class	FullFeatureEnricher<F extends Feature>	Provides full enrichment of feature.
class	FullFeatureEvidenceEnricher	Provides full enrichment of feature evidence.
class	FullFeatureEvidenceUpdater	Provides full update of feature evidence.
class	FullFeatureUpdater<F extends Feature>	Provides full updater of feature.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.impl.minimal

Classes in psidev.psi.mi.jami.enricher.impl.minimal that implement AliasesChangeListener

Modifier and Type	Class	Description
class	MinimalFeatureEnricher<F extends Feature>	Provides minimal enrichment of feature.
class	MinimalFeatureEvidenceEnricher	Provides minimal enrichment of feature evidence.
class	MinimalFeatureEvidenceUpdater	Provides minimal update of feature evidence.
class	MinimalFeatureUpdater<F extends Feature>	Provides minimal update of feature.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.listener

Subinterfaces of AliasesChangeListener in psidev.psi.mi.jami.enricher.listener

Modifier and Type	Interface	Description
interface	BioactiveEntityEnricherListener	Created with IntelliJ IDEA.
interface	ComplexEnricherListener	Listener for complex enrichment
interface	CvTermEnricherListener<C extends CvTerm>	An extension of the CvTermChangeListener with specific methods related to the process of enriching.
interface	ExperimentalParticipantPoolEnricherListener	Experimental Participant pool enricher listener
interface	FeatureEnricherListener<T extends Feature>	An extension of the FeatureChangeListener with specific methods related to the process of enriching.
interface	FeatureEvidenceEnricherListener	An extension of the FeatureChangeListener with specific methods related to the process of enriching.
interface	GeneEnricherListener	Created with IntelliJ IDEA.
interface	InteractorEnricherListener<T extends Interactor>	Interface for interactor enricher listener
interface	InteractorPoolEnricherListener	Interface for interactor pool enricher listener
interface	OntologyTermEnricherListener	An extension of the OntologyTermChangeListener with specific methods related to the process of enriching.
interface	OrganismEnricherListener	Created with IntelliJ IDEA.
interface	ParticipantEnricherListener<P extends Participant>	Created with IntelliJ IDEA.
interface	ParticipantEvidenceEnricherListener<P extends ParticipantEvidence>	Created with IntelliJ IDEA.
interface	ParticipantPoolEnricherListener<P extends ParticipantPool>	Participant pool enricher listener
interface	PolymerEnricherListener<T extends Polymer>	Interface for polymer enricher listener
interface	ProteinEnricherListener	Created with IntelliJ IDEA.
interface	SourceEnricherListener	An extension of the SourceChangeListener with specific methods related to the process of enriching.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.listener.impl

Classes in psidev.psi.mi.jami.enricher.listener.impl that implement AliasesChangeListener

Modifier and Type	Class	Description
class	BioactiveEntityEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	ComplexEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	CvTermEnricherListenerManager<C extends CvTerm>	A manager for listeners which holds a list of listeners.
class	ExperimentalParticipantPoolEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	FeatureEnricherListenerManager<T extends Feature>	A manager for listeners which holds a list of listeners.
class	FeatureEvidenceEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	GeneEnricherListenerManager	Created with IntelliJ IDEA.
class	InteractorEnricherListenerManager<T extends Interactor>	Manager of interactor listeners
class	InteractorPoolEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	OntologyTermEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	OrganismEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	ParticipantEnricherListenerManager<P extends Participant>	A manager for listeners which holds a list of listeners.
class	ParticipantEvidenceEnricherListenerManager<P extends ParticipantEvidence>	A manager for listeners which holds a list of listeners.
class	ParticipantPoolEnricherListenerManager<P extends ParticipantPool>	A manager for listeners which holds a list of listeners.
class	PolymerEnricherListenerManager<P extends Polymer>	A manager for listeners which holds a list of listeners.
class	ProteinEnricherListenerManager	A manager for listeners which holds a list of listeners.
class	SourceEnricherListenerManager	A manager for listeners which holds a list of listeners.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.listener.impl.log

Classes in psidev.psi.mi.jami.enricher.listener.impl.log that implement AliasesChangeListener

Modifier and Type	Class	Description
class	BioactiveEntityEnricherLogger	A logging listener.
class	ComplexEnricherLogger	A logging listener.
class	CvTermEnricherLogger	A logging listener.
class	ExperimentalParticipantPoolEnricherLogger	A logging listener.
class	FeatureEnricherLogger<T extends Feature>	A logging listener.
class	FeatureEvidenceEnricherLogger	A logging listener.
class	GeneEnricherLogger	Created with IntelliJ IDEA.
class	InteractorEnricherLogger<T extends Interactor>	Logger of interactor enrichment
class	InteractorPoolEnricherLogger	A logging listener.
class	OntologyTermEnricherLogger	A logging listener.
class	OrganismEnricherLogger	A logging listener.
class	ParticipantEnricherLogger<P extends Participant>	A logging listener.
class	ParticipantEvidenceEnricherLogger<P extends ParticipantEvidence>	A logging listener.
class	ParticipantPoolEnricherLogger<P extends ParticipantPool>	A logging listener.
class	PolymerEnricherLogger<P extends Polymer>	A logging listener.
class	ProteinEnricherLogger	A logging listener.
class	SourceEnricherLogger	A logging listener.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.listener.impl.writer

Classes in psidev.psi.mi.jami.enricher.listener.impl.writer that implement AliasesChangeListener

Modifier and Type	Class	Description
class	BioactiveEntityEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	ComplexEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	CvTermEnricherStatisticsWriter<C extends CvTerm>	A statistics logger which records changes made by the enricher.
class	ExperimentalParticipantPoolEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	FeatureEnricherStatisticsWriter<T extends Feature>	A statistics logger which records changes made by the enricher.
class	FeatureEvidenceEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	GeneEnricherStatisticsWriter	Created with IntelliJ IDEA.
class	InteractorEnricherStatisticsWriter<T extends Interactor>	TODO comment this
class	InteractorPoolEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	OntologyTermEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	OrganismEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	ParticipantEnricherStatisticsWriter<P extends Participant>	A statistics logger which records changes made by the enricher.
class	ParticipantEvidenceEnricherStatisticsWriter<P extends ParticipantEvidence>	A statistics logger which records changes made by the enricher.
class	ParticipantPoolEnricherStatisticsWriter<P extends ParticipantPool>	A statistics logger which records changes made by the enricher.
class	PolymerEnricherStatisticsWriter<P extends Polymer>	A statistics logger which records changes made by the enricher.
class	ProteinEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.
class	SourceEnricherStatisticsWriter	A statistics logger which records changes made by the enricher.

Uses of AliasesChangeListener in psidev.psi.mi.jami.enricher.util

Methods in psidev.psi.mi.jami.enricher.util with parameters of type AliasesChangeListener

Modifier and Type	Method	Description
static <T> void	EnricherUtils.mergeAliases(T termToEnrich, Collection<Alias> toEnrichAliases, Collection<Alias> fetchedAliases, boolean remove, AliasesChangeListener<T> aliasListener)	mergeAliases.

Uses of AliasesChangeListener in psidev.psi.mi.jami.listener

Subinterfaces of AliasesChangeListener in psidev.psi.mi.jami.listener

Modifier and Type	Interface	Description
interface	ComplexChangeListener	Listener for changes in complex
interface	CvTermChangeListener	CvTerm change listener
interface	FeatureChangeListener<F extends Feature>	Listener to feature change events
interface	FeatureEvidenceChangeListener	Listener which listen to changes in feature evidence
interface	InteractorChangeListener<T extends Interactor>	A generic listener for an interactor.
interface	InteractorPoolChangeListener	Listener of changes in interactor pool
interface	OntologyTermChangeListener	OntologyTerm change listener
interface	OrganismChangeListener	This listener listen to Organism changes
interface	ParticipantChangeListener<F extends Participant>	Listener for changes in a participant
interface	ParticipantEvidenceChangeListener<F extends ParticipantEvidence>	Listener for changes in an experimental entity
interface	ParticipantPoolChangeListener<F extends ParticipantPool>	Listener for changes in a participant pool
interface	PolymerChangeListener<P extends Polymer>	Listener for changes in polymer
interface	ProteinChangeListener	This listener listen to Protein changes
interface	SourceChangeListener	Source change listener

Uses of AliasesChangeListener in psidev.psi.mi.jami.listener.impl

Classes in psidev.psi.mi.jami.listener.impl that implement AliasesChangeListener

Modifier and Type	Class	Description
class	ComplexChangeLogger	This listener will just complex change events
class	CvTermChangeLogger	This listener will just log cvTerm change events
class	ExperimentalParticipantPoolChangeLogger	This listener will just interactor change events
class	FeatureChangeLogger<T extends Feature>	This listener will just interactor change events
class	FeatureEvidenceChangeLogger	This listener will just interactor change events
class	InteractorChangeLogger<T extends Interactor>	This listener will just interactor change events
class	InteractorPoolChangeLogger	This listener will just interactor pool change events
class	OntologyTermChangeLogger	This listener will just log ontologyTerm change events
class	OrganismChangeLogger	This listener will just log organism change events
class	ParticipantChangeLogger<T extends Participant>	This listener will just interactor change events
class	ParticipantEvidenceChangeLogger<T extends ParticipantEvidence>	This listener will just interactor change events
class	ParticipantPoolChangeLogger<T extends ParticipantPool>	This listener will just interactor change events
class	PolymerChangeLogger<P extends Polymer>	This listener will just protein change events
class	ProteinChangeLogger	This listener will just protein change events
class	SourceChangeLogger	This listener will just log Source change events