Package psidev.psi.mi.jami.xml.model.extension

Interface PsiXmlInteraction<T extends Participant>

All Superinterfaces:

FileSourceContext, Interaction<T>, NamedInteraction<T>

All Known Subinterfaces:

ExtendedPsiXmlInteraction<T>, ExtendedPsiXmlInteractionEvidence, ExtendedPsiXmlInteractionEvidence, ExtendedPsiXmlModelledInteraction, ExtendedPsiXmlModelledInteraction

All Known Implementing Classes:

AbstractComplexRef, AbstractComplexRef, AbstractComplexRef, AbstractExtendedXmlBinaryInteraction, AbstractPsiXmlInteraction, AbstractPsiXmlInteraction, AbstractPsiXmlInteraction, AbstractXmlBasicInteraction, AbstractXmlBasicInteraction, AbstractXmlBasicInteraction, AbstractXmlBinaryInteraction, AbstractXmlBinaryInteractionEvidence, AbstractXmlComplex, AbstractXmlComplex, AbstractXmlComplex, AbstractXmlInteractionEvidence, AbstractXmlInteractionEvidence, AbstractXmlInteractionEvidence, AbstractXmlModelledInteraction, AbstractXmlModelledInteraction, AbstractXmlModelledInteraction, DefaultXmlBasicInteraction, DefaultXmlBasicInteraction, DefaultXmlBasicInteraction, DefaultXmlComplex, DefaultXmlComplex, DefaultXmlComplex, DefaultXmlInteractionEvidence, DefaultXmlInteractionEvidence, DefaultXmlInteractionEvidence, DefaultXmlModelledInteraction, DefaultXmlModelledInteraction, DefaultXmlModelledInteraction, XmlBasicInteraction, XmlBasicInteraction, XmlBasicInteraction, XmlBasicInteractionComplexWrapper, XmlBasicInteractionComplexWrapper, XmlBasicInteractionComplexWrapper, XmlBinaryInteraction, XmlBinaryInteractionEvidence, XmlBinaryInteractionEvidence, XmlBinaryInteractionEvidence, XmlBinaryInteractionEvidenceWrapper, XmlBinaryInteractionEvidenceWrapper, XmlBinaryInteractionWrapper, XmlComplex, XmlComplex, XmlComplex, XmlInteractionEvidence, XmlInteractionEvidence, XmlInteractionEvidence, XmlInteractionEvidenceComplexWrapper, XmlInteractionEvidenceComplexWrapper, XmlInteractionEvidenceComplexWrapper, XmlModelledBinaryInteraction, XmlModelledBinaryInteraction, XmlModelledBinaryInteractionWrapper, XmlModelledBinaryInteractionWrapper, XmlModelledInteraction, XmlModelledInteraction, XmlModelledInteraction, XmlModelledInteractionComplexWrapper, XmlModelledInteractionComplexWrapper, XmlModelledInteractionComplexWrapper

public interface PsiXmlInteraction<T extends Participant>
extends NamedInteraction<T>, FileSourceContext

Interaction for PSI-XML which contains the entry

Since:

29/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Method Summary

Modifier and Type	Method	Description
Collection<Alias>	getAliases()	getAliases.
Entry	getEntry()	getEntry.
int	getId()	getId.
boolean	isIntraMolecular()	isIntraMolecular.
void	setEntry(Entry entry)	setEntry.
void	setId(int id)	setId.
void	setIntraMolecular(boolean intra)	setIntraMolecular.

Methods inherited from interface psidev.psi.mi.jami.datasource.FileSourceContext

getSourceLocator, setSourceLocator, toString

Methods inherited from interface psidev.psi.mi.jami.model.Interaction

addAllParticipants, addParticipant, getAnnotations, getChecksums, getCreatedDate, getIdentifiers, getInteractionType, getParticipants, getRigid, getShortName, getUpdatedDate, getXrefs, removeAllParticipants, removeParticipant, setCreatedDate, setInteractionType, setRigid, setShortName, setUpdatedDate

Methods inherited from interface psidev.psi.mi.jami.model.NamedInteraction

getFullName, setFullName

Method Detail

getEntry

Entry getEntry()

getEntry.

Returns:

a Entry object.

setEntry

void setEntry(Entry entry)

setEntry.

Parameters:

entry - a Entry object.

getId

int getId()

getId.

Returns:

a int.

setId

void setId(int id)

setId.

Parameters:

id - a int.

isIntraMolecular

boolean isIntraMolecular()

isIntraMolecular.

Returns:

a boolean.

setIntraMolecular

void setIntraMolecular(boolean intra)

setIntraMolecular.

Parameters:

intra - a boolean.

getAliases

Collection<Alias> getAliases()

getAliases.

Specified by:

getAliases in interface NamedInteraction<T extends Participant>

Returns:

a Collection object.