Package psidev.psi.mi.jami.xml.model.extension

Interface ExtendedPsiXmlInteraction<T extends Participant>

All Superinterfaces:

FileSourceContext, Interaction<T>, NamedInteraction<T>, PsiXmlInteraction<T>

All Known Subinterfaces:

ExtendedPsiXmlInteractionEvidence, ExtendedPsiXmlInteractionEvidence, ExtendedPsiXmlModelledInteraction

All Known Implementing Classes:

AbstractComplexRef, AbstractComplexRef, AbstractComplexRef, AbstractExtendedXmlBinaryInteraction, AbstractPsiXmlInteraction, AbstractPsiXmlInteraction, AbstractPsiXmlInteraction, AbstractXmlBasicInteraction, AbstractXmlBasicInteraction, AbstractXmlBasicInteraction, AbstractXmlBinaryInteractionEvidence, AbstractXmlComplex, AbstractXmlComplex, AbstractXmlComplex, AbstractXmlInteractionEvidence, AbstractXmlInteractionEvidence, AbstractXmlInteractionEvidence, AbstractXmlModelledInteraction, AbstractXmlModelledInteraction, AbstractXmlModelledInteraction, DefaultXmlBasicInteraction, DefaultXmlBasicInteraction, DefaultXmlBasicInteraction, DefaultXmlComplex, DefaultXmlComplex, DefaultXmlComplex, DefaultXmlInteractionEvidence, DefaultXmlInteractionEvidence, DefaultXmlInteractionEvidence, DefaultXmlModelledInteraction, DefaultXmlModelledInteraction, DefaultXmlModelledInteraction, XmlBasicInteraction, XmlBasicInteraction, XmlBasicInteraction, XmlBasicInteractionComplexWrapper, XmlBasicInteractionComplexWrapper, XmlBasicInteractionComplexWrapper, XmlBinaryInteraction, XmlBinaryInteractionEvidence, XmlBinaryInteractionEvidence, XmlBinaryInteractionEvidence, XmlBinaryInteractionEvidenceWrapper, XmlBinaryInteractionEvidenceWrapper, XmlBinaryInteractionWrapper, XmlComplex, XmlComplex, XmlComplex, XmlInteractionEvidence, XmlInteractionEvidence, XmlInteractionEvidence, XmlInteractionEvidenceComplexWrapper, XmlInteractionEvidenceComplexWrapper, XmlInteractionEvidenceComplexWrapper, XmlModelledBinaryInteraction, XmlModelledBinaryInteractionWrapper, XmlModelledInteraction, XmlModelledInteraction, XmlModelledInteractionComplexWrapper, XmlModelledInteractionComplexWrapper, XmlModelledInteractionComplexWrapper

public interface ExtendedPsiXmlInteraction<T extends Participant>
extends PsiXmlInteraction<T>

Extended interaction for PSI-XML 2,5 standards

Since:

29/10/13

Version:

$Id$

Author:

Marine Dumousseau (marine@ebi.ac.uk)

Method Summary

Modifier and Type	Method	Description
Collection<Alias>	getAliases()	getAliases.
List<AbstractInferredInteraction>	getInferredInteractions()	getInferredInteractions.
List<CvTerm>	getInteractionTypes()	getInteractionTypes.

Methods inherited from interface psidev.psi.mi.jami.datasource.FileSourceContext

getSourceLocator, setSourceLocator, toString

Methods inherited from interface psidev.psi.mi.jami.model.Interaction

addAllParticipants, addParticipant, getAnnotations, getChecksums, getCreatedDate, getIdentifiers, getInteractionType, getParticipants, getRigid, getShortName, getUpdatedDate, getXrefs, removeAllParticipants, removeParticipant, setCreatedDate, setInteractionType, setRigid, setShortName, setUpdatedDate

Methods inherited from interface psidev.psi.mi.jami.model.NamedInteraction

getFullName, setFullName

Methods inherited from interface psidev.psi.mi.jami.xml.model.extension.PsiXmlInteraction

getEntry, getId, isIntraMolecular, setEntry, setId, setIntraMolecular

Method Detail

getInteractionTypes

List<CvTerm> getInteractionTypes()

getInteractionTypes.

Returns:

a List object.

getInferredInteractions

List<AbstractInferredInteraction> getInferredInteractions()

getInferredInteractions.

Returns:

a List object.

getAliases

Collection<Alias> getAliases()

getAliases.

Specified by:

getAliases in interface NamedInteraction<T extends Participant>

Specified by:

getAliases in interface PsiXmlInteraction<T extends Participant>

Returns:

a Collection object.