Uses of Interface
psidev.psi.mi.jami.model.ExperimentalEntity

Packages that use ExperimentalEntity

Package	Description
psidev.psi.mi.jami.crosslink.extension
psidev.psi.mi.jami.enricher.impl
psidev.psi.mi.jami.model
psidev.psi.mi.jami.model.impl
psidev.psi.mi.jami.tab.extension
psidev.psi.mi.jami.utils.comparator.participant
psidev.psi.mi.jami.xml.model.extension
psidev.psi.mi.jami.xml.model.extension.xml253
psidev.psi.mi.jami.xml.model.extension.xml254
psidev.psi.mi.jami.xml.model.extension.xml300

Uses of ExperimentalEntity in psidev.psi.mi.jami.crosslink.extension

Classes in psidev.psi.mi.jami.crosslink.extension that implement ExperimentalEntity

Modifier and Type	Class	Description
class	CsvExperimentalParticipantCandidate	Crosslink CSV extension of ExperimentalParticipantCandidate.
class	CsvExperimentalParticipantPool	Crosslink CSV extension of ParticipantEvidencePool.
class	CsvParticipantEvidence	Crosslink CSV extension of ParticipantEvidence.

Uses of ExperimentalEntity in psidev.psi.mi.jami.enricher.impl

Methods in psidev.psi.mi.jami.enricher.impl that return types with arguments of type ExperimentalEntity

Modifier and Type	Method	Description
EntityEnricher<ExperimentalEntity,FeatureEvidence>	CompositeEntityEnricher.getExperimentalEntityEnricher()	Getter for the field experimentalEntityEnricher.

Method parameters in psidev.psi.mi.jami.enricher.impl with type arguments of type ExperimentalEntity

Modifier and Type	Method	Description
void	CompositeEntityEnricher.setExperimentalEntityEnricher(EntityEnricher<ExperimentalEntity,FeatureEvidence> experimentalEntityEnricher)	Setter for the field experimentalEntityEnricher.

Uses of ExperimentalEntity in psidev.psi.mi.jami.model

Subinterfaces of ExperimentalEntity in psidev.psi.mi.jami.model

Modifier and Type	Interface	Description
interface	ExperimentalParticipantCandidate	Interface for experimental participant candidates
interface	ExperimentalParticipantPool	A pool of experimental participants
interface	ParticipantEvidence	Participant of an interaction which is supported by experimental evidences

Uses of ExperimentalEntity in psidev.psi.mi.jami.model.impl

Classes in psidev.psi.mi.jami.model.impl that implement ExperimentalEntity

Modifier and Type	Class	Description
class	DefaultExperimentalParticipantCandidate	Default implementation of experimental participant candidate
class	DefaultExperimentalParticipantPool	Default implementation of ExperimentalParticipantPool
class	DefaultNamedParticipantEvidence	Default implementation of named participant evidence
class	DefaultParticipantEvidence	Default implementation for ParticipantEvidence Notes: The equals and hashcode methods have NOT been overridden because the ParticipantEvidence object is a complex object.

Uses of ExperimentalEntity in psidev.psi.mi.jami.tab.extension

Classes in psidev.psi.mi.jami.tab.extension that implement ExperimentalEntity

Modifier and Type	Class	Description
class	MitabParticipantEvidence	Mitab extension of ParticipantEvidence.

Uses of ExperimentalEntity in psidev.psi.mi.jami.utils.comparator.participant

Methods in psidev.psi.mi.jami.utils.comparator.participant that return types with arguments of type ExperimentalEntity

Modifier and Type	Method	Description
Comparator<ExperimentalEntity>	ExperimentalParticipantPoolComparator.getExperimentalEntityComparator()	Getter for the field experimentalEntityComparator.

Methods in psidev.psi.mi.jami.utils.comparator.participant with parameters of type ExperimentalEntity

Modifier and Type	Method	Description
static boolean	DefaultExactExperimentalEntityComparator.areEquals(ExperimentalEntity participant1, ExperimentalEntity participant2, boolean checkComplexesAsInteractors)	Use DefaultExactExperimentalEntityComparator to know if two experimental entities are equals.
static boolean	DefaultExactParticipantEvidenceInteractorComparator.areEquals(ExperimentalEntity participant1, ExperimentalEntity participant2)	Use DefaultExactParticipantEvidenceInteractorComparator to know if two experimental participants are equals.
static boolean	DefaultExperimentalEntityComparator.areEquals(ExperimentalEntity participant1, ExperimentalEntity participant2, boolean checkComplexesAsInteractors)	Use DefaultExperimentalEntityComparator to know if two experimental entities are equals.
static boolean	DefaultParticipantEvidenceInteractorComparator.areEquals(ExperimentalEntity participant1, ExperimentalEntity participant2)	Use DefaultParticipantEvidenceInteractorComparator to know if two experimental participants are equals.
static boolean	UnambiguousExactExperimentalEntityComparator.areEquals(ExperimentalEntity experimentalParticipant1, ExperimentalEntity component2)	Use UnambiguousExperimentalEntityComparator to know if two experimental participants are equals.
static boolean	UnambiguousExactParticipantEvidenceInteractorComparator.areEquals(ExperimentalEntity experimentalParticipant1, ExperimentalEntity component2)	It will compare the basic properties of an interactor using UnambiguousExactInteractorComparator.
static boolean	UnambiguousExperimentalEntityComparator.areEquals(ExperimentalEntity experimentalParticipant1, ExperimentalEntity component2)	Use UnambiguousExperimentalEntityComparator to know if two experimental participants are equals.
static boolean	UnambiguousParticipantEvidenceInteractorComparator.areEquals(ExperimentalEntity experimentalParticipant1, ExperimentalEntity component2)	Use UnambiguousParticipantEvidenceInteractorComparator to know if two experimental participants are equals.
int	ExperimentalEntityComparator.compare(ExperimentalEntity experimentalParticipant1, ExperimentalEntity experimentalParticipant2)	It will compare the basic properties of an experimental entity using EntityBaseComparator and FeatureEvidenceComparator.
int	UnambiguousExactExperimentalEntityComparator.compare(ExperimentalEntity experimentalParticipant1, ExperimentalEntity experimentalParticipant2)
int	UnambiguousExactParticipantEvidenceInteractorComparator.compare(ExperimentalEntity experimentalParticipant1, ExperimentalEntity experimentalParticipant2)	It will compare the basic properties of an interactor using UnambiguousInteractorComparator.
int	UnambiguousExperimentalEntityComparator.compare(ExperimentalEntity experimentalParticipant1, ExperimentalEntity experimentalParticipant2)
int	UnambiguousParticipantEvidenceInteractorComparator.compare(ExperimentalEntity experimentalParticipant1, ExperimentalEntity experimentalParticipant2)	It will compare the interactors using InteractorComparator.

Uses of ExperimentalEntity in psidev.psi.mi.jami.xml.model.extension

Subinterfaces of ExperimentalEntity in psidev.psi.mi.jami.xml.model.extension

Modifier and Type	Interface	Description
interface	ExtendedPsiXmlParticipantEvidence	Extended participant evidence for PSI-XML 2,5 standards

Uses of ExperimentalEntity in psidev.psi.mi.jami.xml.model.extension.xml253

Classes in psidev.psi.mi.jami.xml.model.extension.xml253 that implement ExperimentalEntity

Modifier and Type	Class	Description
class	XmlExperimentalParticipantCandidate	Xml implementation of ParticipantEvidence
class	XmlExperimentalParticipantPool	Xml implementation of participant pool
class	XmlParticipantEvidence	Xml implementation of ParticipantEvidence

Uses of ExperimentalEntity in psidev.psi.mi.jami.xml.model.extension.xml254

Classes in psidev.psi.mi.jami.xml.model.extension.xml254 that implement ExperimentalEntity

Modifier and Type	Class	Description
class	XmlExperimentalParticipantCandidate	Xml implementation of ParticipantEvidence
class	XmlExperimentalParticipantPool	Xml implementation of participant pool
class	XmlParticipantEvidence	Xml implementation of ParticipantEvidence

Uses of ExperimentalEntity in psidev.psi.mi.jami.xml.model.extension.xml300

Classes in psidev.psi.mi.jami.xml.model.extension.xml300 that implement ExperimentalEntity

Modifier and Type	Class	Description
class	XmlExperimentalParticipantCandidate	Xml implementation of ParticipantEvidence
class	XmlExperimentalParticipantPool	Xml implementation of participant pool
class	XmlParticipantEvidence	Xml implementation of ParticipantEvidence