Uses of Interface
psidev.psi.mi.jami.xml.io.parser.PsiXmlParser

Packages that use PsiXmlParser

Package	Description
psidev.psi.mi.jami.xml.io.iterator
psidev.psi.mi.jami.xml.io.parser
psidev.psi.mi.jami.xml.model.extension.datasource

Uses of PsiXmlParser in psidev.psi.mi.jami.xml.io.iterator

Constructors in psidev.psi.mi.jami.xml.io.iterator with parameters of type PsiXmlParser

Constructor	Description
AbstractXmlIterator(PsiXmlParser<T> lineParser)	Constructor for AbstractXmlIterator.
XmlBinaryInteractionEvidenceIterator(PsiXmlParser<BinaryInteractionEvidence> lineParser)	Constructor for XmlBinaryInteractionEvidenceIterator.
XmlBinaryInteractionIterator(PsiXmlParser<BinaryInteraction> lineParser)	Constructor for XmlBinaryInteractionIterator.
XmlComplexIterator(PsiXmlParser<Complex> lineParser)	Constructor for XmlComplexIterator.
XmlInteractionEvidenceIterator(PsiXmlParser<InteractionEvidence> lineParser)	Constructor for XmlInteractionEvidenceIterator.
XmlInteractionIterator(PsiXmlParser<Interaction> lineParser)	Constructor for XmlInteractionIterator.
XmlModelledBinaryInteractionIterator(PsiXmlParser<ModelledBinaryInteraction> lineParser)	Constructor for XmlModelledBinaryInteractionIterator.
XmlModelledInteractionIterator(PsiXmlParser<ModelledInteraction> lineParser)	Constructor for XmlModelledInteractionIterator.

Uses of PsiXmlParser in psidev.psi.mi.jami.xml.io.parser

Classes in psidev.psi.mi.jami.xml.io.parser that implement PsiXmlParser

Modifier and Type	Class	Description
class	AbstractFullPsiXmlParser<T extends Interaction>	This class if for parser that will load the all file in memory
class	AbstractPsixmlBinaryParser<T extends Interaction,B extends BinaryInteraction>	Abstract class for a binary interaction parser
class	AbstractPsiXmlParser<T extends Interaction>	Parser for PSI-XML Returns an Iterator of interactions.
class	FullXmlBinaryEvidenceParser	Full Parser generating basic binary interaction objects and ignoring all experimental details.
class	FullXmlBinaryParser	Full Parser generating binary interactions that could be a mix or abstract interactions and interaction evidences.
class	FullXmlComplexParser	Full Parser generating biological complex objects and ignore experimental details.
class	FullXmlEvidenceParser	Full Parser generating interaction evidence objects and loading all experimental details.
class	FullXmlModelledBinaryParser	Full Parser generating binary modelled interaction objects and ignoring all experimental details.
class	FullXmlModelledParser	Full Parser generating modelled interaction objects and ignore experimental details.
class	FullXmlParser	Full Parser generating interaction objects that could be a mix or abstract interactions and interaction evidences.
class	LightFullXmlBinaryParser	Full Parser generating basic binary interaction objects and ignoring all experimental details.
class	LightFullXmlParser	Full Parser generating basic interaction objects and ignore experimental details.
class	LightXmlBinaryParser	Xml parser creating light binary interactions and ignoring experimental details
class	LightXmlParser	Parser generating basic interaction objects and ignore experimental details
class	XmlBinaryEvidenceParser	Xml parser creating binary interaction evidences
class	XmlBinaryParser	Xml parser creating binary interactions that can be a mix of interaction evidences and abstract interactions
class	XmlComplexParser	Parser generating biological complex objects and ignore experimental details
class	XmlEvidenceParser	Parser generating interaction evidence objects with all experimental details
class	XmlModelledBinaryParser	Xml parser creating modelled binary interaction
class	XmlModelledParser	Parser generating modelled interaction objects and ignore experimental details
class	XmlParser	Parser generating interaction objects that can be interaction evidences or abstract interactions.

Methods in psidev.psi.mi.jami.xml.io.parser that return PsiXmlParser

Modifier and Type	Method	Description
protected PsiXmlParser<T>	AbstractPsixmlBinaryParser.getDelegateParser()	Getter for the field delegateParser.

Constructors in psidev.psi.mi.jami.xml.io.parser with parameters of type PsiXmlParser

Constructor	Description
AbstractPsixmlBinaryParser(PsiXmlParser<T> delegateParser)	Constructor for AbstractPsixmlBinaryParser.

Uses of PsiXmlParser in psidev.psi.mi.jami.xml.model.extension.datasource

Methods in psidev.psi.mi.jami.xml.model.extension.datasource that return PsiXmlParser

Modifier and Type	Method	Description
protected PsiXmlParser<T>	AbstractPsiXmlStream.getParser()	Getter for the field parser.

Methods in psidev.psi.mi.jami.xml.model.extension.datasource with parameters of type PsiXmlParser

Modifier and Type	Method	Description
protected void	AbstractPsiXmlStream.setParser(PsiXmlParser<T> parser)	Setter for the field parser.