Uses of Interface
psidev.psi.mi.jami.enricher.MIEnricher

Packages that use MIEnricher

Package	Description
psidev.psi.mi.jami.enricher
psidev.psi.mi.jami.enricher.impl
psidev.psi.mi.jami.enricher.impl.full
psidev.psi.mi.jami.enricher.impl.minimal
psidev.psi.mi.jami.imex

Uses of MIEnricher in psidev.psi.mi.jami.enricher

Subinterfaces of MIEnricher in psidev.psi.mi.jami.enricher

Modifier and Type	Interface	Description
interface	ComplexEnricher	The enricher for Interactions which can enrich a single interaction or a collection.
interface	CuratedPublicationEnricher	An enricher for curated publications which can enrich either a single publication or a collection.
interface	CvTermEnricher<C extends CvTerm>	The CvTerm enricher is an enricher which can enrich either single cvTerm or a collection.
interface	EntityEnricher<P extends Entity,F extends Feature>	Sub enrichers: Protein, CvTerm, Feature, Bioactive3Entity
interface	ExperimentalParticipantPoolEnricher	The Participant pool enricher is an enricher which can enrich either single Participant pool or a collection.
interface	ExperimentEnricher	The experimentEnricher can enrich either a single experiment or a collection.
interface	FeatureEnricher<F extends Feature>	The featureEnricher can enrich either a single feature or a collection.
interface	InteractionEnricher<I extends Interaction>	The enricher for Interactions which can enrich a single interaction or a collection.
interface	InteractionEvidenceEnricher	An enricher for interaction evidences.
interface	InteractorEnricher<T extends Interactor>	Interface for interactor enrichers.
interface	InteractorPoolEnricher	The Interactor pool enricher is an enricher which can enrich either single interactor pool or a collection.
interface	ModelledInteractionEnricher<I extends ModelledInteraction>	The enricher for Interactions which can enrich a single interaction or a collection.
interface	OrganismEnricher	An organism enricher which can enrich either a single organism or a collection.
interface	ParticipantEnricher<P extends Participant,F extends Feature>	Sub enrichers: Protein, CvTerm, Feature, Bioactive3Entity
interface	ParticipantEvidenceEnricher<T extends ParticipantEvidence>	The Participant pool enricher is an enricher which can enrich either single Participant pool or a collection.
interface	ParticipantPoolEnricher<P extends ParticipantPool,F extends Feature>	Sub enrichers: Protein, CvTerm, Feature, Bioactive3Entity
interface	ProteinEnricher	The Protein enricher is an enricher which can enrich either single protein or a collection.
interface	ProteinListeningFeatureEnricher<F extends Feature>	An extension to the feature enricher, the protein listening form also updates ranges.
interface	PublicationEnricher	An enricher for publications which can enrich either a single publication or a collection.
interface	SourceEnricher	The source enricher is an enricher which can enrich either single source or a collection.

Uses of MIEnricher in psidev.psi.mi.jami.enricher.impl

Classes in psidev.psi.mi.jami.enricher.impl that implement MIEnricher

Modifier and Type	Class	Description
class	AbstractInteractorEnricher<T extends Interactor>	Abstract class for enricher of interactors Minimal enrichment: - enrich fullname of an interactor.
class	AbstractInteractorUpdater<T extends Interactor>	Abstract class for updater of interactors Minimal update: - enrich shortname of an interactor.
class	AbstractMIEnricher<T>	Abstract implementation of a MIEnricher
class	CompositeEntityEnricher	General enricher for entities and participants candidates that can use sub enrichers for enriching specific interactors
class	CompositeInteractorEnricher	General enricher for interactors that can use sub enrichers for enriching specific interactors
class	CompositeModelledParticipantEnricher	General enricher for entities and participants that can use sub enrichers for enriching specific interactors
class	CompositeParticipantEnricher	General enricher for entities and participants that can use sub enrichers for enriching specific interactors
class	CompositeParticipantEvidenceEnricher	General enricher for entities and participants that can use sub enrichers for enriching specific interactors

Uses of MIEnricher in psidev.psi.mi.jami.enricher.impl.full

Classes in psidev.psi.mi.jami.enricher.impl.full that implement MIEnricher

Modifier and Type	Class	Description
class	FullBioactiveEntityEnricher	A full enricher for bioactive entities.
class	FullBioactiveEntityUpdater	A full updater for bioactive entities.
class	FullComplexEnricher	Full enricher for complexes
class	FullComplexUpdater	Full enricher for complexes
class	FullCuratedPublicationEnricher	Provides full enrichment of curated Publication.
class	FullCuratedPublicationUpdater	Provides full update of Publication.
class	FullCvTermEnricher<C extends CvTerm>	Provides full enrichment of cv term.
class	FullCvTermUpdater<C extends CvTerm>	Provides full update of cv term.
class	FullEntityEnricher<P extends Entity,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	FullEntityUpdater<P extends Entity,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	FullExperimentalParticipantPoolEnricher	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	FullExperimentalParticipantPoolUpdater	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	FullExperimentEnricher	Provides full enrichment of experiment.
class	FullExperimentUpdater	Provides full update of experiment.
class	FullFeatureEnricher<F extends Feature>	Provides full enrichment of feature.
class	FullFeatureEvidenceEnricher	Provides full enrichment of feature evidence.
class	FullFeatureEvidenceUpdater	Provides full update of feature evidence.
class	FullFeatureUpdater<F extends Feature>	Provides full updater of feature.
class	FullGeneEnricher	A full enricher for genes.
class	FullGeneUpdater	A full updater for genes.
class	FullInteractionEnricher<I extends Interaction>	Full enricher for interactions
class	FullInteractionEvidenceEnricher	Full enricher for Interaction evidence
class	FullInteractionEvidenceUpdater	Full updater for interaction evidence
class	FullInteractionUpdater<I extends Interaction>	Full updater of interaction
class	FullInteractorBaseEnricher<T extends Interactor>	Full interactor enricher
class	FullInteractorBaseUpdater<T extends Interactor>	Full updater of interactor
class	FullInteractorPoolEnricher	A full enricher for interactor pools.
class	FullInteractorPoolUpdater	A full updater for interactor pools.
class	FullModelledInteractionEnricher<I extends ModelledInteraction>	Full enricher for ModelledInteraction
class	FullModelledInteractionUpdater<I extends ModelledInteraction>	Full updater of a modelled interaction
class	FullOntologyTermEnricher	Provides full enrichment of ontologYTerm.
class	FullOntologyTermUpdater	Provides full update of ontologYTerm.
class	FullOrganismEnricher	Provides full enrichment of a Organism.
class	FullOrganismUpdater	Provides full update of a Organism.
class	FullParticipantEnricher<P extends Participant,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	FullParticipantEvidenceEnricher<P extends ParticipantEvidence>	Created with IntelliJ IDEA.
class	FullParticipantEvidenceUpdater<P extends ParticipantEvidence>	Created with IntelliJ IDEA.
class	FullParticipantPoolEnricher<P extends ParticipantPool,F extends Feature>	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	FullParticipantPoolUpdater<P extends ParticipantPool,F extends Feature>	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	FullParticipantUpdater<P extends Participant,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	FullPolymerEnricher<T extends Polymer>	Full polymer enricher.
class	FullPolymerUpdater<T extends Polymer>	Full updater of polymer - update all properties of interactor as described in FullInteractorBaseUpdater - update sequence of polymer.
class	FullProteinEnricher	Full enricher of proteins.
class	FullProteinUpdater	Full updater of proteins.
class	FullPublicationEnricher	Provides full enrichment of Publication.
class	FullPublicationUpdater	Provides full update of Publication.
class	FullSourceEnricher	Provides full enrichment of a Source.
class	FullSourceUpdater	Provides full update of a Source.

Uses of MIEnricher in psidev.psi.mi.jami.enricher.impl.minimal

Classes in psidev.psi.mi.jami.enricher.impl.minimal that implement MIEnricher

Modifier and Type	Class	Description
class	MinimalBioactiveEntityEnricher	A basic minimal enricher for bioactive entities.
class	MinimalBioactiveEntityUpdater	A basic minimal updater for bioactive entities.
class	MinimalComplexEnricher	Minimal enricher for complexes
class	MinimalComplexUpdater	Minimal updater for complexes
class	MinimalCuratedPublicationEnricher	Provides minimal enrichment of curatedPublication.
class	MinimalCuratedPublicationUpdater	Provides minimal update of curated Publication.
class	MinimalCvTermEnricher<C extends CvTerm>	Provides minimal enrichment of cv term.
class	MinimalCvTermUpdater<C extends CvTerm>	Provides minimal update of cv term.
class	MinimalEntityEnricher<P extends Entity,F extends Feature>	The entity enricher is an enricher which can enrich either single participant or a collection.
class	MinimalEntityUpdater<P extends Entity,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	MinimalExperimentalParticipantPoolEnricher	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	MinimalExperimentalParticipantPoolUpdater	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	MinimalExperimentEnricher	Provides minimal enrichment of experiment.
class	MinimalExperimentUpdater	Provides minimal update of experiment.
class	MinimalFeatureEnricher<F extends Feature>	Provides minimal enrichment of feature.
class	MinimalFeatureEvidenceEnricher	Provides minimal enrichment of feature evidence.
class	MinimalFeatureEvidenceUpdater	Provides minimal update of feature evidence.
class	MinimalFeatureUpdater<F extends Feature>	Provides minimal update of feature.
class	MinimalGeneEnricher	A basic minimal enricher for genes.
class	MinimalGeneUpdater	A basic minimal updater for genes.
class	MinimalInteractionEnricher<I extends Interaction>	The enricher for Interactions which can enrich a single interaction or a collection.
class	MinimalInteractionEvidenceEnricher	Minimal enricher for interaction evidence
class	MinimalInteractionEvidenceUpdater	Minimal updater for interaction evidence
class	MinimalInteractionUpdater<I extends Interaction>	The enricher for Interactions which can enrich a single interaction or a collection.
class	MinimalInteractorBaseEnricher<T extends Interactor>	A basic minimal enricher for interactors.
class	MinimalInteractorBaseUpdater<T extends Interactor>	A basic minimal updater for interactors.
class	MinimalModelledInteractionEnricher<I extends ModelledInteraction>	Minimal enricher for modelled interactions
class	MinimalModelledInteractionUpdater<I extends ModelledInteraction>	Minimal updater for modelled interaction
class	MinimalOntologyTermEnricher	Provides minimal enrichment of ontologYTerm.
class	MinimalOntologyTermUpdater	Provides minimal update of ontologYTerm.
class	MinimalOrganismEnricher	Provides minimum enrichment of a Organism.
class	MinimalOrganismUpdater	Provides minimum update of a Organism.
class	MinimalParticipantEnricher<P extends Participant,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	MinimalParticipantEvidenceEnricher<P extends ParticipantEvidence>	Created with IntelliJ IDEA.
class	MinimalParticipantEvidenceUpdater<P extends ParticipantEvidence>	Created with IntelliJ IDEA.
class	MinimalParticipantPoolEnricher<P extends ParticipantPool,F extends Feature>	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	MinimalParticipantPoolUpdater<P extends ParticipantPool,F extends Feature>	The participant pool enricher is an enricher which can enrich either single participant or a collection.
class	MinimalParticipantUpdater<P extends Participant,F extends Feature>	The participant enricher is an enricher which can enrich either single participant or a collection.
class	MinimalProteinEnricher	Enriches a protein to the minimum level.
class	MinimalProteinUpdater	Updates a protein to the minimum level.
class	MinimalPublicationEnricher	Provides minimal enrichment of Publication.
class	MinimalPublicationUpdater	Provides minimal update of Publication.
class	MinimalSourceEnricher	Provides minimum enrichment of a Source.
class	MinimalSourceUpdater	Provides minimum update of a Source.

Uses of MIEnricher in psidev.psi.mi.jami.imex

Classes in psidev.psi.mi.jami.imex that implement MIEnricher

Modifier and Type	Class	Description
class	ImexExperimentUpdater	This enricher will update an experiment attached to a publication having an IMEx id
class	ImexInteractionUpdater	This enricher will update a interaction evidence having a publication with IMEx id
class	ImexPublicationAssigner	This enricher will update a publication having IMEx id and synchronize it with IMEx central
class	ImexPublicationRegister	This enricher will update a publication having IMEx id and synchronize it with IMEx central
class	ImexPublicationUpdater	This enricher will update a publication having IMEx id and synchronize it with IMEx central